RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 PRPF39Q86UA1 669 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 ZC3H18Q86VM9 953 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SPATA18Q8TC71 538 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 KCNN1Q92952 543 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SYNCQ9H7C4 482 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SPATS2LQ9NUQ6 558 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 DLGAP2Q9P1A6 1054 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 COL4A5P29400 1685 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 ABLIM1O14639 778 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 MCF2LO15068 1137 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 FAM189A1O60320 539 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 RARBP10826 455 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 POLR2BP30876 1174 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 ORC1Q13415 861 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 THEMIS2Q5TEJ8 643 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 MECRQ9BV79 373 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 NXF1Q9UBU9 619 aaKnown RBP15.17■□□□□ 0.02
GFRA1-201ENST00000355422 TEX264Q9Y6I9 313 aa15.17■□□□□ 0.02
GFRA1-201ENST00000355422 SMAPO00193 183 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ADCY3O60266 1144 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 MIPP30301 263 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 RFC5P40937 340 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 AP3M2P53677 418 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 MMRN1Q13201 1228 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 RCN2Q14257 317 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 LBRQ14739 615 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 DUOXA2Q1HG44 320 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 DARS2Q6PI48 645 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ZBED3Q96IU2 234 aaPredicted RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 TEPSINQ96N21 525 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 SRPK1Q96SB4 655 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 CPXM1Q96SM3 734 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ARHGEF4Q9NR80 690 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 TRIM49D1C9J1S8 452 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 COPEO14579 308 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 SP100P23497 879 aaPredicted RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ASPAP45381 313 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 YWHAEP62258 255 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 OCRLQ01968 901 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 THOC5Q13769 683 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ZNF699Q32M78 642 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 IRGCQ6NXR0 463 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 CTAGE3PQ8IX95 158 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 STMN2Q93045 179 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 CFAP36Q96G28 342 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
GFRA1-201ENST00000355422 LRCH1Q9Y2L9 728 aa15.16■□□□□ 0.02
GFRA1-201ENST00000355422 ERBB2P04626 1255 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 AMPD1P23109 780 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 PGM1P36871 562 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 PPM1NQ8N819 430 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 CMASQ8NFW8 434 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 CFAP61Q8NHU2 1237 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 FBXO27Q8NI29 283 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 FNIP1Q8TF40 1166 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 WASF2Q9Y6W5 498 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 B2RBV5 119 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 SMIM24O75264 130 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 NPTXRO95502 500 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 SKIP12755 728 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 GCLCP48506 637 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 ROR1Q01973 937 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 FSTL1Q12841 308 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 KCNJ11Q14654 390 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 HSF5Q4G112 596 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 XYLT1Q86Y38 959 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 AGBL3Q8NEM8 1001 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 FAF2Q96CS3 445 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 ZBTB10Q96DT7 871 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 XYLT2Q9H1B5 865 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 MMADHCQ9H3L0 296 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 ZNF395Q9H8N7 513 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
GFRA1-201ENST00000355422 USP18Q9UMW8 372 aa15.15■□□□□ 0.02
GFRA1-201ENST00000355422 PSME4Q14997 1843 aa15.14■□□□□ 0.01
GFRA1-201ENST00000355422 CXorf49A8MYA2 514 aaPredicted RBP15.14■□□□□ 0.01
GFRA1-201ENST00000355422 H3BRJ5 948 aa15.14■□□□□ 0.01
GFRA1-201ENST00000355422 TRUB2O95900 331 aaKnown RBP15.14■□□□□ 0.01
GFRA1-201ENST00000355422 ENO1P06733 434 aaKnown RBP15.14■□□□□ 0.01
GFRA1-201ENST00000355422 CDH8P55286 799 aa15.14■□□□□ 0.01
GFRA1-201ENST00000355422 TMEM132BQ14DG7 1078 aa15.14■□□□□ 0.01
GFRA1-201ENST00000355422 TREML1Q86YW5 311 aa15.14■□□□□ 0.01
GFRA1-201ENST00000355422 PRPF31Q8WWY3 499 aaKnown RBP15.14■□□□□ 0.01
GFRA1-201ENST00000355422 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms