RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 MRPS5P82675 430 aaKnown RBP11.31□□□□□ -0.6
SND1-201ENST00000354725 SPP2Q13103 211 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 MAPK7Q13164 816 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 PSMD6Q15008 389 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 ODF2Q5BJF6 829 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 MFSD5Q6N075 450 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 OTOP1Q7RTM1 612 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 NSMCE3Q96MG7 304 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 H0YC42 278 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 CDK4P11802 303 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 CCR3P51677 355 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 DCTN2Q13561 401 aaKnown RBP11.31□□□□□ -0.6
SND1-201ENST00000354725 STK11Q15831 433 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 ARL13BQ3SXY8 428 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
SND1-201ENST00000354725 RIBC1Q8N443 379 aaPredicted RBP11.31□□□□□ -0.6
SND1-201ENST00000354725 ARHGEF2Q92974 986 aaKnown RBP11.31□□□□□ -0.6
SND1-201ENST00000354725 NUDCD1Q96RS6 583 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 PARVBQ9HBI1 364 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 SAMD15Q9P1V8 674 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 AMFRQ9UKV5 643 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 EDARQ9UNE0 448 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 CASP8AP2Q9UKL3 1982 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 ZBED4O75132 1171 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 SLITRK3O94933 977 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 APOEP02649 317 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 FGGP02679 453 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 SHBGP04278 402 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 CETPP11597 493 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 KLHL35Q6PF15 583 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 ZNF720Q7Z2F6 126 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 C12orf56Q8IXR9 622 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 GOLM1Q8NBJ4 401 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 FMO2Q99518 471 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 KIAA1257Q9ULG3 409 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 GOLGA8JA6NMD2 632 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 GOLGA8TH3BQL2 631 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PSMC2P35998 433 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 CDC26Q8NHZ8 85 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 GAB3Q8WWW8 586 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 STARD8Q92502 1023 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 RAB3IPQ96QF0 476 aaPredicted RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 DDX50Q9BQ39 737 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 TAS2R14Q9NYV8 317 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PFASO15067 1338 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 NDC80O14777 642 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PABPC4LP0CB38 370 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 CCNCP24863 283 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 C1orf220Q5T0J3 134 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PPP2R2DQ66LE6 453 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PRELID2Q8N945 189 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PPP1R10Q96QC0 940 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 ELAC2Q9BQ52 826 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 IKZF4Q9H2S9 585 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 AVENQ9NQS1 362 aaPredicted RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
SND1-201ENST00000354725 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
SND1-201ENST00000354725 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 FAM25EA8MYX2 175 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 MEIS1O00470 390 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 PHF2O75151 1096 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 GGPS1O95749 300 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 LYNP07948 512 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 VHLP40337 213 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 CETN2P41208 172 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 DNA2P51530 1060 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 DR1Q01658 176 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■□□□ 13.7
SND1-201ENST00000354725 DRAP1Q14919 205 aaPredicted RBP11.29□□□□□ -0.6
SND1-201ENST00000354725 ADRM1Q16186 407 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 GSTA3Q16772 222 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 ANKDD1AQ495B1 522 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 PRR16Q569H4 304 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 ZNF746Q6NUN9 644 aaPredicted RBP11.29□□□□□ -0.6
SND1-201ENST00000354725 TTC27Q6P3X3 843 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 Q6ZNX1 250 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 JAMLQ86YT9 394 aa11.29□□□□□ -0.6
SND1-201ENST00000354725 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms