RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 DSG1Q02413 1049 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 GAD2Q05329 585 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 XKR3Q5GH77 459 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 ARHGEF16Q5VV41 709 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 CMASQ8NFW8 434 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 PPP2R3CQ969Q6 453 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 AZIN2Q96A70 460 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 CDHR1Q96JP9 859 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 NMUR2Q9GZQ4 415 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 DMAP1Q9NPF5 467 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 MCF2LO15068 1137 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 LYNP07948 512 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 PYGBP11216 843 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 PSMA2P25787 234 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 ACOT2P49753 483 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 KCNJ11Q14654 390 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 ZYXQ15942 572 aaKnown RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 FAM83AQ86UY5 434 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 WDR49Q8IV35 697 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 WDTC1Q8N5D0 677 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 E2F7Q96AV8 911 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SRPK1Q96SB4 655 aaKnown RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 MAF1Q9H063 256 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 RSAD1Q9HA92 442 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 FAM237BA0A1B0GVD1 139 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 LRCH4O75427 683 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SERPINA6P08185 405 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 PRKCHP24723 683 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SOX10P56693 466 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 WASHC5Q12768 1159 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SURF1Q15526 300 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SLC5A9Q2M3M2 681 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 KBTBD12Q3ZCT8 623 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 STXBP5Q5T5C0 1151 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 ARCQ7LC44 396 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 UNC45BQ8IWX7 931 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 LRRC39Q96DD0 335 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 PRR11Q96HE9 360 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-202ENST00000354537 FAM161BQ96MY7 647 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 ECSITQ9BQ95 431 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 MSTO1Q9BUK6 570 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 PIDD1Q9HB75 910 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SLC9A2Q9UBY0 812 aa11.91□□□□□ -0.5
CAPN9-202ENST00000354537 SIP14410 1827 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 TCRBV7S3A2A0A539 114 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 K7ERI5 159 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 PDLIM1O00151 329 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 MAP3K13O43283 966 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 UPP2O95045 317 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 ATG7O95352 703 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 C1QAP02745 245 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 KRT3P12035 628 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 KCNA2P16389 499 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 AMPD1P23109 780 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 RPS6KA3P51812 740 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 FOXB2Q5VYV0 432 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 C4orf22Q6V702 233 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 CRLF3Q8IUI8 442 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 BRSK2Q8IWQ3 736 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 RBM15BQ8NDT2 890 aaKnown RBP11.9□□□□□ -0.5
CAPN9-202ENST00000354537 OLFM3Q96PB7 478 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 NIF3L1Q9GZT8 377 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 HAPLN2Q9GZV7 340 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 PORCNQ9H237 461 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 C12orf65Q9H3J6 166 aaKnown RBP11.9□□□□□ -0.5
CAPN9-202ENST00000354537 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 ALG13Q9NP73 1137 aaKnown RBP11.9□□□□□ -0.5
CAPN9-202ENST00000354537 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 TBC1D30Q9Y2I9 924 aa11.9□□□□□ -0.5
CAPN9-202ENST00000354537 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 KBTBD13C9JR72 458 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 MED7O43513 233 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 SNNO75324 88 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 ENDOD1O94919 500 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 AOC1P19801 751 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 ARL2P36404 184 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 MAGEA6P43360 314 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PSMC4P43686 418 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TGFB2P61812 414 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PRKCEQ02156 737 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 CNTN2Q02246 1040 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 CUL3Q13618 768 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 EMC2Q15006 297 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 FAM47CQ5HY64 1035 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 SWSAP1Q6NVH7 229 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 ABHD15Q6UXT9 468 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 RIPOR1Q6ZS17 1223 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms