RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 IGSF22Q8N9C0 903 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ADAMTS14Q8WXS8 1223 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ERLEC1Q96DZ1 483 aa12□□□□□ -0.49
RTN3-204ENST00000354497 PNMA5Q96PV4 448 aa12□□□□□ -0.49
RTN3-204ENST00000354497 ARHGEF4Q9NR80 690 aa12□□□□□ -0.49
RTN3-204ENST00000354497 GCNT4Q9P109 453 aa12□□□□□ -0.49
RTN3-204ENST00000354497 LARSQ9P2J5 1176 aaKnown RBP12□□□□□ -0.49
RTN3-204ENST00000354497 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
RTN3-204ENST00000354497 DERAQ9Y315 318 aa12□□□□□ -0.49
RTN3-204ENST00000354497 OBSL1O75147 1896 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 KPNA7A9QM74 516 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 FAM189A1O60320 539 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 NASPP49321 788 aaPredicted RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 NCKAP1LP55160 1127 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 ATP2C1P98194 919 aaPredicted RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 ZNF33AQ06730 810 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 PLEKHG6Q3KR16 790 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 GLIS3Q8NEA6 775 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 LRRC15Q8TF66 581 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 CDK5RAP3Q96JB5 506 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 ZNF560Q96MR9 790 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 ZHX3Q9H4I2 956 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 CAPN10Q9HC96 672 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 SMPD4Q9NXE4 827 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 DDX43Q9NXZ2 648 aaKnown RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 ARHGAP26Q9UNA1 814 aa11.99□□□□□ -0.49
RTN3-204ENST00000354497 APOBEC2Q9Y235 224 aaKnown RBP11.99□□□□□ -0.49
RTN3-204ENST00000354497 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 ADAMTS9Q9P2N4 1935 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 LAMA5O15230 3695 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 ASCC3Q8N3C0 2202 aaKnown RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 ABL1P00519 1130 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 ADRB2P07550 413 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 PLA2G4BP0C869 781 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 DDIT3P35638 169 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 WASP42768 502 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 PDE6CP51160 858 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 MYL7Q01449 175 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 MESP2Q0VG99 397 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 DHCR24Q15392 516 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 CCDC142Q17RM4 750 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 GAB4Q2WGN9 574 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 HSF5Q4G112 596 aaPredicted RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 ADALQ6DHV7 355 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 DTHD1Q6ZMT9 781 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 C12orf40Q86WS4 652 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 MYCT1Q8N699 235 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 TRIML1Q8N9V2 468 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 ANKRD7Q92527 254 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 HSPA12BQ96MM6 686 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 DNAAF2Q9NVR5 837 aaKnown RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 GTF3C4Q9UKN8 822 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 CYP8B1Q9UNU6 501 aa11.98□□□□□ -0.49
RTN3-204ENST00000354497 SETXQ7Z333 2677 aaKnown RBP11.98□□□□□ -0.49
RTN3-204ENST00000354497 ANK1P16157 1881 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 A0A0B4J269 797 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 GOLGA8CPA6NN73 597 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 ZBTB24O43167 697 aaPredicted RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 HUS1O60921 280 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 ADAM23O75077 832 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 FAM13AO94988 1023 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 PRB1P04280 392 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 C19orf57Q0VDD7 668 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 DHX8Q14562 1220 aaKnown RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 LCE2DQ5TA82 110 aaPredicted RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 SYT2Q8N9I0 419 aaPredicted RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 SETD7Q8WTS6 366 aaKnown RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 LEO1Q8WVC0 666 aaPredicted RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 CRELD1Q96HD1 420 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 MYRFLQ96LU7 910 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 GBP4Q96PP9 640 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 MYCBPQ99417 103 aaPredicted RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 NCAPGQ9BPX3 1015 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 MMTAG2Q9BU76 263 aaKnown RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 ASB7Q9H672 318 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 TRPM5Q9NZQ8 1165 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 L1RE1Q9UN81 338 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 CPQQ9Y646 472 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 SMG1Q96Q15 3661 aaKnown RBP11.97□□□□□ -0.49
RTN3-204ENST00000354497 DENND4CQ5VZ89 1909 aa11.97□□□□□ -0.49
RTN3-204ENST00000354497 TBC1D3BA6NDS4 549 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.96□□□□□ -0.49
RTN3-204ENST00000354497 TISP43B9A030 160 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 HCRTO43612 131 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 NDUFS2O75306 463 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 ADH1CP00326 375 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 PIGRP01833 764 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 KRT18P05783 430 aaKnown RBP11.96□□□□□ -0.49
RTN3-204ENST00000354497 ADH5P11766 374 aa11.96□□□□□ -0.49
RTN3-204ENST00000354497 TCF3P15923 654 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms