RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ERBB2P04626 1255 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 PFKMP08237 780 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 SKIP12755 728 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 CDH5P33151 784 aaPredicted RBP14.09□□□□□ -0.15
UBA3-201ENST00000349511 TCEAL1Q15170 157 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 PLEKHG4Q58EX7 1191 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 GLB1LQ6UWU2 654 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 UBL4BQ8N7F7 174 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 SEC16BQ96JE7 1060 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 LHX5Q9H2C1 402 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 AVENQ9NQS1 362 aaPredicted RBP14.09□□□□□ -0.15
UBA3-201ENST00000349511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.09□□□□□ -0.15
UBA3-201ENST00000349511 RASAL2Q9UJF2 1139 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 USTQ9Y2C2 406 aa14.09□□□□□ -0.15
UBA3-201ENST00000349511 CLDN5O00501 218 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 MTA2O94776 668 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 CALB1P05937 261 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 NUDT17P0C025 328 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 DRG2P55039 364 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 GRIK3Q13003 919 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 KIAA0319Q5VV43 1072 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 PLEKHA7Q6IQ23 1121 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 LCLAT1Q6UWP7 414 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 HOOK3Q86VS8 718 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 ZDHHC14Q8IZN3 488 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 PRELID2Q8N945 189 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 MDM1Q8TC05 714 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 FBXO25Q8TCJ0 367 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 VCPIP1Q96JH7 1222 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 PABPC3Q9H361 631 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 UBN1Q9NPG3 1134 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 PARVAQ9NVD7 372 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 DDX43Q9NXZ2 648 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 HCSTQ9UBK5 93 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 CTNNA2P26232 953 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 CHRNA3P32297 505 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 RABGGTBP53611 331 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 RNASELQ05823 741 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 TUSC3Q13454 348 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 BYSLQ13895 437 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 PMF1Q6P1K2 205 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 DNAJC24Q6P3W2 148 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 DCUN1D2Q6PH85 259 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 CCDC121Q6ZUS5 278 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 UNC93AQ86WB7 457 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 TTC39CQ8N584 583 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 FEZF2Q8TBJ5 459 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 CNOT10Q9H9A5 744 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 MRPL47Q9HD33 250 aaKnown RBP14.08□□□□□ -0.16
UBA3-201ENST00000349511 GRHL1Q9NZI5 618 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 DNAJB4Q9UDY4 337 aa14.08□□□□□ -0.16
UBA3-201ENST00000349511 E5RJQ4 531 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 EOMESO95936 686 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 GJC1P36383 396 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 SSR1P43307 286 aaKnown RBP14.07□□□□□ -0.16
UBA3-201ENST00000349511 OR1G1P47890 313 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 PEX5P50542 639 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 PDE4CQ08493 712 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 DENND2CQ68D51 928 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 TOP6BLQ8N6T0 577 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 EMC1Q8N766 993 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 PIWIL1Q96J94 861 aaKnown RBP14.07□□□□□ -0.16
UBA3-201ENST00000349511 CABS1Q96KC9 395 aa14.07□□□□□ -0.16
UBA3-201ENST00000349511 PRG3Q9Y2Y8 225 aaPredicted RBP14.07□□□□□ -0.16
UBA3-201ENST00000349511 GRAP2O75791 330 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 UPP2O95045 317 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 HSPA1AP0DMV8 641 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 HSPA1BP0DMV9 641 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 DRD4P21917 467 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 RPL9P32969 192 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 RPL21P46778 160 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 FAM189BP81408 668 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 OGDHQ02218 1023 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 NOMO2Q5JPE7 1267 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 ERMARDQ5T6L9 678 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SEL1L2Q5TEA6 688 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 CD300LGQ6UXG3 332 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 XYLT1Q86Y38 959 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 JOSD2Q8TAC2 188 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 SEPT8Q92599 483 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 XPO6Q96QU8 1125 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 METTL5Q9NRN9 209 aaKnown RBP14.06□□□□□ -0.16
UBA3-201ENST00000349511 TMEM39AQ9NV64 488 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 TBC1D13Q9NVG8 400 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 HESX1Q9UBX0 185 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 PCYOX1Q9UHG3 505 aa14.06□□□□□ -0.16
UBA3-201ENST00000349511 KIAA1257Q9ULG3 409 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms