RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 EMILIN2Q9BXX0 1053 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 SYNCQ9H7C4 482 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 GOLGA6L9A6NEM1 432 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 EPOPA6NHQ4 379 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 ADH1AP07327 375 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 ZNF268Q14587 947 aaPredicted RBP28.52■■■□□ 2.16
SSBP4-202ENST00000348495 LILRA6Q6PI73 481 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 WDR35Q9P2L0 1181 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 CHORDC1Q9UHD1 332 aaPredicted RBP28.52■■■□□ 2.16
SSBP4-202ENST00000348495 PIK3R2O00459 728 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 TNFRSF10BO14763 440 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 PAPSS1O43252 624 aaPredicted RBP28.51■■■□□ 2.15
SSBP4-202ENST00000348495 SEC24AO95486 1093 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 CA8P35219 290 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 LRIT3Q3SXY7 679 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 ARHGAP29Q52LW3 1261 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 SCN4BQ8IWT1 228 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 MCRS1Q96EZ8 462 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 LMAN2LQ9H0V9 348 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 MYO1AQ9UBC5 1043 aa28.51■■■□□ 2.15
SSBP4-202ENST00000348495 MAMLD1Q13495 774 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 DDR2Q16832 855 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 PHLDB2Q86SQ0 1253 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 C3orf20Q8ND61 904 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 SLC35G2Q8TBE7 412 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 MICAL1Q8TDZ2 1067 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 SEPT5Q99719 369 aaPredicted RBP28.5■■■□□ 2.15
SSBP4-202ENST00000348495 LRRC4Q9HBW1 653 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 COG5Q9UP83 839 aa28.5■■■□□ 2.15
SSBP4-202ENST00000348495 CSPG5O95196 566 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 TUFMP49411 452 aaKnown RBP28.49■■■□□ 2.15
SSBP4-202ENST00000348495 GPR15P49685 360 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 ADIGQ0VDE8 80 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 MGAT5BQ3V5L5 792 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 PPP1R15BQ5SWA1 713 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 FAM183BPQ6ZVS7 135 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 ZDHHC17Q8IUH5 632 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 SCUBE3Q8IX30 993 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 RHOT2Q8IXI1 618 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 TCEAL8Q8IYN2 117 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 PARVAQ9NVD7 372 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 GUCA1BQ9UMX6 200 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 TGM5O43548 720 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 SOAT2O75908 522 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 MTA2O94776 668 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 LCP1P13796 627 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 MSNP26038 577 aaKnown RBP28.49■■■□□ 2.15
SSBP4-202ENST00000348495 TKTL1P51854 596 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 OLFML1Q6UWY5 402 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 GDPD5Q8WTR4 605 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 SPATA17Q96L03 361 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 NUP85Q9BW27 656 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 OSGEPQ9NPF4 335 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 UVRAGQ9P2Y5 699 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 USP3Q9Y6I4 520 aa28.49■■■□□ 2.15
SSBP4-202ENST00000348495 ESPNB1AK53 854 aa28.48■■■□□ 2.15
SSBP4-202ENST00000348495 HADHBP55084 474 aaKnown RBP28.48■■■□□ 2.15
SSBP4-202ENST00000348495 RPL10AP62906 217 aaKnown RBP28.48■■■□□ 2.15
SSBP4-202ENST00000348495 SDHAF4Q5VUM1 108 aa28.48■■■□□ 2.15
SSBP4-202ENST00000348495 RNF10Q8N5U6 811 aaKnown RBP28.48■■■□□ 2.15
SSBP4-202ENST00000348495 PIWIL1Q96J94 861 aaKnown RBP28.48■■■□□ 2.15
SSBP4-202ENST00000348495 CEP295NLQ96MC4 621 aa28.48■■■□□ 2.15
SSBP4-202ENST00000348495 SCINQ9Y6U3 715 aa28.48■■■□□ 2.15
SSBP4-202ENST00000348495 PLXNA3P51805 1871 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 ATG2AQ2TAZ0 1938 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 MACROD2A1Z1Q3 448 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 LPXNO60711 386 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 C1RP00736 705 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 ATF6P18850 670 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 KLRC2P26717 231 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 SLC5A3P53794 718 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 OR6B2Q6IFH4 312 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 DNAJC24Q6P3W2 148 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 SIX6OS1Q8N1H7 587 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 CYP4F11Q9HBI6 524 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 MRPL47Q9HD33 250 aaKnown RBP28.47■■■□□ 2.15
SSBP4-202ENST00000348495 CNGB3Q9NQW8 809 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 CTTNBP2NLQ9P2B4 639 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 COLQQ9Y215 455 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-202ENST00000348495 PAXBP1Q9Y5B6 917 aa28.47■■■□□ 2.15
SSBP4-202ENST00000348495 COL4A4P53420 1690 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-202ENST00000348495 FBXO21O94952 628 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 SCNN1AP37088 669 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 SLC6A3Q01959 620 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 SCML4Q8N228 414 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 CLEC4CQ8WTT0 213 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 KHSRPQ92945 711 aaKnown RBP eCLIP28.46■■■□□ 2.15
SSBP4-202ENST00000348495 IL37Q9NZH6 218 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 FBXW11Q9UKB1 542 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 SIGLEC16A6NMB1 481 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 CLCN4P51793 760 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 PM20D1Q6GTS8 502 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 SCAMP5Q8TAC9 235 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 IRX2Q9BZI1 471 aaPredicted RBP28.46■■■□□ 2.15
SSBP4-202ENST00000348495 ULBP1Q9BZM6 244 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 YIPF1Q9Y548 306 aa28.46■■■□□ 2.15
SSBP4-202ENST00000348495 MYO7AQ13402 2215 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 GOLGA8SH3BPF8 625 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 BUB1O43683 1085 aa28.45■■■□□ 2.14
SSBP4-202ENST00000348495 GJB6O95452 261 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms