RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CMASQ8NFW8 434 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TCP10LQ8TDR4 215 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 C10orf82Q8WW14 230 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CDHR1Q96JP9 859 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 MIPEPQ99797 713 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PITPNM3Q9BZ71 974 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ETNK2Q9NVF9 386 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 SAMD15Q9P1V8 674 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 DRG1Q9Y295 367 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 SCINQ9Y6U3 715 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PLXNA1Q9UIW2 1896 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ACKR2O00590 384 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 CYB561D2O14569 222 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 B4GALT4O60513 344 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TJP3O95049 919 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ADORA2AP29274 412 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 POLR2BP30876 1174 aaKnown RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 GBP1P32455 592 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ELK3P41970 407 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 NDST1P52848 882 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 DPYSL3Q14195 570 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF268Q14587 947 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 SNCBQ16143 134 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TAPT1Q6NXT6 567 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TRIM72Q6ZMU5 477 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 SYDE1Q6ZW31 735 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PYROXD2Q8N2H3 581 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 PLD5Q8N7P1 536 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 TMEM35BQ8NCS4 154 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 GRK7Q8WTQ7 553 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 C18orf25Q96B23 403 aaPredicted RBP6.33□□□□□ -1.4
CLCN3-201ENST00000347613 HOMER3Q9NSC5 361 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 USP18Q9UMW8 372 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 ZSWIM8A7E2V4 1837 aa6.33□□□□□ -1.4
CLCN3-201ENST00000347613 A0A0G2JLL6 359 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MAGEB2O15479 319 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 STAM2O75886 525 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ENDOD1O94919 500 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ALADP13716 330 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RFC5P40937 340 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PGGT1BP53609 377 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 FAAP100Q0VG06 881 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MYO1EQ12965 1108 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 STAT4Q14765 748 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 KBTBD12Q3ZCT8 623 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 EFHC2Q5JST6 749 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 GLRA4Q5JXX5 417 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 IER5Q5VY09 327 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 FAM219BQ5XKK7 198 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TRMT10BQ6PF06 316 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF534Q76KX8 674 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 APBB1IPQ7Z5R6 666 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PRRT2Q7Z6L0 340 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 USP37Q86T82 979 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CAND1Q86VP6 1230 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TTC8Q8TAM2 541 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF75CPQ92670 426 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 LENG1Q96BZ8 264 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ERP27Q96DN0 273 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MCRS1Q96EZ8 462 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ZNF570Q96NI8 536 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PAFAH2Q99487 392 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CALN1Q9BXU9 219 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 FBXO6Q9NRD1 293 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 NRBP2Q9NSY0 501 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 XPO7Q9UIA9 1087 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PPME1Q9Y570 386 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TCRBV9S1A1TA0A576 114 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 M0QYV0 167 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 EDF1O60869 148 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 METTL18O95568 372 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 HMGCRP04035 888 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TXNP10599 105 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 CCNB1P14635 433 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 LMO2P25791 158 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ERFP50548 548 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 LACTBP83111 547 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PTPN11Q06124 597 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ARHGAP1Q07960 439 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TRPC3Q13507 836 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 BBS9Q3SYG4 887 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RINLQ6ZS11 566 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 BBS12Q6ZW61 710 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 BANPQ8N9N5 519 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 PCDH19Q8TAB3 1148 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 KCNV2Q8TDN2 545 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RXFP2Q8WXD0 754 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 MOCOSQ96EN8 888 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 EIF2AQ9BY44 585 aaKnown RBP6.32□□□□□ -1.4
CLCN3-201ENST00000347613 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 GINM1Q9NU53 330 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 FAM49BQ9NUQ9 324 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 TUBGCP4Q9UGJ1 667 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 DCTN4Q9UJW0 460 aa6.32□□□□□ -1.4
CLCN3-201ENST00000347613 ARL2BPQ9Y2Y0 163 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms