RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 TAF10Q12962 218 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 STXBP5Q5T5C0 1151 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 CACNA2D4Q7Z3S7 1137 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 FAM71AQ8IYT1 594 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 ZSWIM1Q9BR11 485 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 TTLL2Q9BWV7 592 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 FBXO44Q9H4M3 255 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 PNPLA8Q9NP80 782 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 TRPM5Q9NZQ8 1165 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 IFNKQ9P0W0 207 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 DOCK8Q8NF50 2099 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 F8VZ95 297 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 BPIFB4P59827 614 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 TMEM150AQ86TG1 271 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 PIGZQ86VD9 579 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 RNF135Q8IUD6 432 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 ZSWIM3Q96MP5 696 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 TPM3P06753 285 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 SETSIPP0DME0 302 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 CLCN1P35523 988 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 PLCB2Q00722 1185 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 SMYD5Q6GMV2 418 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 GPRIN1Q7Z2K8 1008 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 SLC47A2Q86VL8 602 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 MAB21L3Q8N8X9 362 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 TRPC7Q9HCX4 862 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 COMMD8Q9NX08 183 aa21.97■■□□□ 1.11
SMARCB1-202ENST00000344921 ZNF638Q14966 1978 aaKnown RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 A0A1W2PQC6 194 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 HHLA1C9JL84 531 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 XPO1O14980 1071 aaKnown RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 ASGR2P07307 311 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 TXNDC8Q6A555 127 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 ZSCAN18Q8TBC5 510 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 SECISBP2LQ93073 1101 aaKnown RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 COL25A1Q9BXS0 654 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 UBXN6Q9BZV1 441 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 TASP1Q9H6P5 420 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 KCNK12Q9HB15 430 aa21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 CHORDC1Q9UHD1 332 aaPredicted RBP21.96■■□□□ 1.11
SMARCB1-202ENST00000344921 TULP2O00295 520 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 TADA3O75528 432 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 DDX6P26196 483 aaKnown RBP eCLIP21.95■■□□□ 1.19e-7■■■■■ 33.4
SMARCB1-202ENST00000344921 KRT9P35527 623 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 PPP3CCP48454 512 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 POTEHQ6S545 545 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 MTSS1LQ765P7 747 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 PDZD8Q8NEN9 1154 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 PDCL3Q9H2J4 239 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 LRRC4Q9HBW1 653 aa21.95■■□□□ 1.1
SMARCB1-202ENST00000344921 GFPT2O94808 682 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 AVPR1AP37288 418 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 STAT1P42224 750 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 PDE6CP51160 858 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 KIF11P52732 1056 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 PKDCCQ504Y2 493 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 FAM78AQ5JUQ0 283 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 PARM1Q6UWI2 310 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 GPIHBP1Q8IV16 184 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 RSAD2Q8WXG1 361 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 FGF14Q92915 247 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 SMARCD2Q92925 531 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 ASB16Q96NS5 453 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 SLC46A2Q9BY10 475 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 IL37Q9NZH6 218 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 IGSF9Q9P2J2 1179 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 ZMYM5Q9UJ78 669 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 SOX5P35711 763 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 PLA2G4AP47712 749 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 RGS7P49802 495 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 TKTL1P51854 596 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 JAM2P57087 298 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 OVCA2Q8WZ82 227 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 XPO4Q9C0E2 1151 aaKnown RBP21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 ZFP14Q9HCL3 533 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 ST7Q9NRC1 585 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 GMIPQ9P107 970 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 NUMBLQ9Y6R0 609 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 PATJQ8NI35 1801 aa21.94■■□□□ 1.1
SMARCB1-202ENST00000344921 DENND4CQ5VZ89 1909 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 ZNF840PA6NDX5 716 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 CBFA2T2O43439 604 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 CYP11B1P15538 503 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 DENND1BQ6P3S1 775 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 MON1AQ86VX9 555 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 ARID3BQ8IVW6 561 aaPredicted RBP21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 CMTM8Q8IZV2 173 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 SLC35F5Q8WV83 523 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 NXPE3Q969Y0 559 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 KXD1Q9BQD3 176 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 TLR8Q9NR97 1041 aaKnown RBP21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 MUTYHQ9UIF7 546 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 OBSL1O75147 1896 aa21.93■■□□□ 1.1
SMARCB1-202ENST00000344921 C2orf78A6NCI8 922 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 DPYSL4O14531 572 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 CFHP08603 1231 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 LCP1P13796 627 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 ARID5AQ03989 594 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 HTR4Q13639 388 aa21.92■■□□□ 1.1
SMARCB1-202ENST00000344921 PMF1Q6P1K2 205 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms