RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TBCELQ5QJ74 424 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 RNF217Q8TC41 542 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 RRN3Q9NYV6 651 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 STMN3Q9NZ72 180 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 PCDHGB4Q9UN71 923 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 CPS1P31327 1500 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 LZTS3O60299 673 aaPredicted RBP18.7■□□□□ 0.58
SMC4-201ENST00000344722 CBFA2T3O75081 653 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 PYGLP06737 847 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 XIAPP98170 497 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 XKR3Q5GH77 459 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 NAPEPLDQ6IQ20 393 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 KAT2BQ92831 832 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 TMCO1Q9UM00 188 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 IGSF9BQ9UPX0 1349 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 SMNDC1O75940 238 aaKnown RBP eCLIP18.69■□□□□ 0.582e-16■■■■■ 67.6
SMC4-201ENST00000344722 FKBP9O95302 570 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 EARS2Q5JPH6 523 aaKnown RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 DUPD1Q68J44 220 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 FKBP9P1Q75LS8 142 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 MED15Q96RN5 788 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 CYLDQ9NQC7 956 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 RNF146Q9NTX7 359 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 RPS6KL1Q9Y6S9 549 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 PRKCIP41743 596 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 RGS7P49802 495 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.69■□□□□ 0.587e-6■■■□□ 17.7
SMC4-201ENST00000344722 ARMCX4Q5H9R4 360 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 ZNF554Q86TJ5 538 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 NMRK1Q9NWW6 199 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 TBX20Q9UMR3 447 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 PDK2Q15119 407 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 SLC10A5Q5PT55 438 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 TTC27Q6P3X3 843 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 SLC47A2Q86VL8 602 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 ART4Q93070 314 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 ZNF518BQ9C0D4 1074 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 REXO2Q9Y3B8 237 aaKnown RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 MGRN1O60291 552 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 CSTF3Q12996 717 aaKnown RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 HEATR4Q86WZ0 1026 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 TRIM54Q9BYV2 358 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 CLIC5Q9NZA1 410 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 TRIM24O15164 1050 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 ABHD2P08910 425 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 LAMC2Q13753 1193 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 STKLD1Q8NE28 680 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 TNIP3Q96KP6 325 aa18.69■□□□□ 0.58
SMC4-201ENST00000344722 FAM32AQ9Y421 112 aaKnown RBP18.69■□□□□ 0.58
SMC4-201ENST00000344722 CAMTA2O94983 1202 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 ITGA9Q13797 1035 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 RGS21Q2M5E4 152 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 MIIPQ5JXC2 388 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 AGAP9Q5VTM2 703 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 JPH1Q9HDC5 661 aaPredicted RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 HMG20AQ9NP66 347 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 PRR23D1E9PI22 279 aaPredicted RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 PRR23D2P0DMB1 279 aaPredicted RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 TGM2P21980 687 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 CCDC153Q494R4 210 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 RSBN1Q5VWQ0 802 aaPredicted RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 DENND1BQ6P3S1 775 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 LINC00523Q86TU6 105 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 EXOC3L1Q86VI1 746 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 SHCBP1Q8NEM2 672 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 VTI1BQ9UEU0 232 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 MSH4O15457 936 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 CLOCKO15516 846 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 BMPR2Q13873 1038 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 AAGABQ6PD74 315 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 SLIT1O75093 1534 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 GOLGA8TH3BQL2 631 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 PROCP04070 461 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 FDX1P10109 184 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 RBP5P82980 135 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 POU5F2Q8N7G0 328 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 KIF12Q96FN5 646 aa18.68■□□□□ 0.58
SMC4-201ENST00000344722 RUVBL2Q9Y230 463 aaKnown RBP18.68■□□□□ 0.58
SMC4-201ENST00000344722 CCDC78A2IDD5 438 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TBKBP1A7MCY6 615 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 SUPT3HB4E1H0 165 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 MMRN1Q13201 1228 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TRIM25Q14258 630 aaKnown RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 RBM44Q6ZP01 1051 aaKnown RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 THEM5Q8N1Q8 247 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 ZNF560Q96MR9 790 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 TRIM45Q9H8W5 580 aaPredicted RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 ATP6V1E1P36543 226 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 N4BP2L1Q5TBK1 243 aaPredicted RBP18.67■□□□□ 0.58
SMC4-201ENST00000344722 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
SMC4-201ENST00000344722 FBXO40Q9UH90 709 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms