RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TJP2Q9UDY2 1190 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 FZD1Q9UP38 647 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 PCDHAC2Q9Y5I4 1007 aa8.37□□□□□ -1.07
UBE4B-202ENST00000343090 GTPBP10A4D1E9 387 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 SYCE1LA8MT33 242 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 M0QYT0 321 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 XPO1O14980 1071 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 STMN1P16949 149 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 NAMPTP43490 491 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PGM5Q15124 567 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 NBPF12Q5TAG4 269 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 MCOLN2Q8IZK6 566 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TFB1MQ8WVM0 346 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 APOL2Q9BQE5 337 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ANGPT2O15123 496 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 SPAG6O75602 509 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CBX6O95503 412 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 GARTP22102 1010 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PTGER2P43116 358 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 OCA2Q04671 838 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TRADDQ15628 312 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PPP1R15BQ5SWA1 713 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 APOBEC3HQ6NTF7 200 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 LRRC6Q86X45 466 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 FAM172AQ8WUF8 416 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PPCSQ9HAB8 311 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 MRPL40Q9NQ50 206 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 GALNT8Q9NY28 637 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 RIMBP3CA6NJZ7 1639 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 RIMBP3BA6NNM3 1639 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 RIMBP3Q9UFD9 1639 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ANKRD63C9JTQ0 380 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PJA2O43164 708 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 AKAP10O43572 662 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 BGNP21810 368 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PDAP1Q13442 181 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 KIZQ2M2Z5 673 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 BTNL9Q6UXG8 535 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 C4orf19Q8IY42 314 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ACTL9Q8TC94 416 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 SCFD2Q8WU76 684 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CNBD2Q96M20 576 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 GCNAQ96QF7 691 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 DDX50Q9BQ39 737 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 DCLK3Q9C098 648 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 HSD3B7Q9H2F3 369 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PIH1D1Q9NWS0 290 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 V9GYQ6 96 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TNPO2O14787 897 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 FANCGO15287 622 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 PMPCBO75439 489 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ESRRBO95718 433 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 VIL1P09327 827 aaKnown RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CXCL8P10145 99 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 BACE1P56817 501 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 MCL1Q07820 350 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TEDDM1Q5T9Z0 273 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 TTC30BQ8N4P2 665 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 EFHBQ8N7U6 833 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 AGBL3Q8NEM8 1001 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ZBTB45Q96K62 511 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CCT7Q99832 543 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 CTNNAL1Q9UBT7 734 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 USP18Q9UMW8 372 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 RPS6KL1Q9Y6S9 549 aa8.36□□□□□ -1.07
UBE4B-202ENST00000343090 ENTPD5O75356 428 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CD4P01730 458 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SHBGP04278 402 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 STAG3L1P0CL83 205 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SCNN1BP51168 640 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ARHGDIAP52565 204 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ARHGEF6Q15052 776 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CCNG2Q16589 344 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 BOLA3Q53S33 107 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 RNF219Q5W0B1 726 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MPZL3Q6UWV2 235 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 LRRC55Q6ZSA7 311 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ASAP3Q8TDY4 903 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 EME1Q96AY2 570 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CHST7Q9NS84 486 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CDYLQ9Y232 598 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 KLHL2O95198 593 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 CLPTM1O96005 669 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 STIP1P31948 543 aaKnown RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 GLRBP48167 497 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 SERPINB8P50452 374 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MAPRE2Q15555 327 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 KCTD21Q4G0X4 260 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 FAM131BQ86XD5 332 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ABRAQ8N0Z2 381 aa8.35□□□□□ -1.07
UBE4B-202ENST00000343090 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBE4B-202ENST00000343090 MOSPD1Q9UJG1 213 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms