RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TIMM13Q9Y5L4 95 aaPredicted RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 DOCK8Q8NF50 2099 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 A0A1W2PP55 124 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 LOC730098B7Z3J9 87 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 CYB561D2O14569 222 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 RFPL2O75678 378 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 AKAP3O75969 853 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 C8AP07357 584 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 HNRNPA1P09651 372 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM3-207ENST00000341372 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 ATF2P15336 505 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 BMP6P22004 513 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 RPL13P26373 211 aaKnown RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 AP3M2P53677 418 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 PIN1Q13526 163 aaPredicted RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 PEAR1Q5VY43 1037 aaPredicted RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 TMC5Q6UXY8 1006 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 USP37Q86T82 979 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 CCDC127Q96BQ5 260 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 RTP3Q9BQQ7 232 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 LRRC3Q9BY71 257 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 POMKQ9H5K3 350 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 AFF4Q9UHB7 1163 aaKnown RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
TPM3-207ENST00000341372 FRMD4BQ9Y2L6 1034 aa10.99□□□□□ -0.65
TPM3-207ENST00000341372 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 TNNI1P19237 187 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 PTMSP20962 102 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 LRRC63Q05C16 580 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 INO80DQ53TQ3 878 aaPredicted RBP10.98□□□□□ -0.65
TPM3-207ENST00000341372 ATAT1Q5SQI0 421 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 C1orf220Q5T0J3 134 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
TPM3-207ENST00000341372 LIN9Q5TKA1 542 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 SPATA31D4Q6ZUB0 917 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 TCEAL8Q8IYN2 117 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 TRIML1Q8N9V2 468 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 CD320Q9NPF0 282 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 DOCK6Q96HP0 2047 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 NOTCH4Q99466 2003 aa10.98□□□□□ -0.65
TPM3-207ENST00000341372 CCDC195A0A1B0GUA6 201 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 IKBKBO14920 756 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 VNN2O95498 520 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 KRT19P08727 400 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CCNE1P24864 410 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 PMS1P54277 932 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 BFSP1Q12934 665 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 MYO1EQ12965 1108 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 GPR17Q13304 367 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 TDRD10Q5VZ19 366 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 WSCD1Q658N2 575 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CEP135Q66GS9 1140 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CCDC149Q6ZUS6 474 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 LHFPL2Q6ZUX7 228 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 INTS8Q75QN2 995 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 TMEM86AQ8N2M4 240 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 OR10T2Q8NGX3 314 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 SLC7A14Q8TBB6 771 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 E2F7Q96AV8 911 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 DHTKD1Q96HY7 919 aaPredicted RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 L1RE1Q9UN81 338 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 DLL1O00548 723 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 GABRDO14764 452 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 PSMA7O14818 248 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CST3P01034 146 aaPredicted RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 WEE2P0C1S8 567 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 PSMC2P35998 433 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 DLG4P78352 724 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CENPCQ03188 943 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 ADAM9Q13443 819 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 STIM1Q13586 685 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 RAPGEF1Q13905 1077 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 ZACNQ401N2 412 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 PPM1LQ5SGD2 360 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 METTL23Q86XA0 190 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 FAM186BQ8IYM0 893 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 PDCL2Q8N4E4 241 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 SMG7Q92540 1137 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 HPDLQ96IR7 371 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 XYLT2Q9H1B5 865 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 CLSTN2Q9H4D0 955 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 WDR6Q9NNW5 1121 aaKnown RBP10.97□□□□□ -0.65
TPM3-207ENST00000341372 HSFX1Q9UBD0 423 aa10.97□□□□□ -0.65
TPM3-207ENST00000341372 TNFRSF10AO00220 468 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 SLC16A3O15427 465 aaKnown RBP10.96□□□□□ -0.65
TPM3-207ENST00000341372 SEC24AO95486 1093 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 FAM163BP0C2L3 166 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 CPB1P15086 417 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 ATICP31939 592 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 VAMP7P51809 220 aa10.96□□□□□ -0.65
TPM3-207ENST00000341372 FKBP3Q00688 224 aaKnown RBP10.96□□□□□ -0.65
TPM3-207ENST00000341372 MLC1Q15049 377 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms