RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 KRT3P12035 628 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CD19P15391 556 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ATF7P17544 494 aaPredicted RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 GABRB2P47870 512 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ACAP1Q15027 740 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 QPCTQ16769 361 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 P3H1Q32P28 736 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CYP4A22Q5TCH4 519 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 GSTA5Q7RTV2 222 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 NT5DC4Q86YG4 428 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 SLC4A11Q8NBS3 891 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 SEC16BQ96JE7 1060 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 SDCBP2Q9H190 292 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CYTH4Q9UIA0 394 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TANC1Q9C0D5 1861 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TRIM43BA6NCK2 446 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CCDC85CA6NKD9 419 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 GHRP10912 638 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 P4HA1P13674 534 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 PSMA2P25787 234 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CYP2C18P33260 490 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 RFC1P35251 1148 aaPredicted RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 VPS41P49754 854 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 STAT4Q14765 748 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CNGA2Q16280 664 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CCDC142Q17RM4 750 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TXNRD3NBQ6F5E7 133 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 JADE1Q6IE81 842 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 CPLX4Q7Z7G2 160 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 FAM228AQ86W67 206 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TMEM130Q8N3G9 435 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TTC39CQ8N584 583 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 SLC35B2Q8TB61 432 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 P3H4Q92791 437 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 TRIM43Q96BQ3 446 aaPredicted RBP14.08□□□□□ -0.16
TRIM60-201ENST00000341062 FAM118BQ9BPY3 351 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 EURLQ9NYK6 297 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 ZNF148Q9UQR1 794 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 C2CD2Q9Y426 696 aa14.08□□□□□ -0.16
TRIM60-201ENST00000341062 LRRD1A4D1F6 860 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 CDH16O75309 829 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 LRCH4O75427 683 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 ITGB3P05106 788 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 DARSP14868 501 aaKnown RBP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 HOXA11P31270 313 aaPredicted RBP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 CCL23P55773 120 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 PSMC1P62191 440 aaKnown RBP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 LPIN1Q14693 890 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 MORF4L2Q15014 288 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 HADHQ16836 314 aaKnown RBP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 KAZNQ674X7 775 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 RIBC1Q8N443 379 aaPredicted RBP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 TTC13Q8NBP0 860 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 TMEM176AQ96HP8 235 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 RBM15Q96T37 977 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 PCDH9Q9HC56 1237 aa14.07□□□□□ -0.16
TRIM60-201ENST00000341062 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM60-201ENST00000341062 TSPAN1O60635 241 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 NBNO60934 754 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 VDRP11473 427 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ARF4P18085 180 aaPredicted RBP14.06□□□□□ -0.16
TRIM60-201ENST00000341062 CD52P31358 61 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ARSEP51690 589 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 IFT88Q13099 833 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 SLC10A6Q3KNW5 377 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 BBS12Q6ZW61 710 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 JOSD2Q8TAC2 188 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 MCRS1Q96EZ8 462 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 CABS1Q96KC9 395 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 TTC25Q96NG3 672 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 CPXM1Q96SM3 734 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 CCDC77Q9BR77 488 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 PHACTR1Q9C0D0 580 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ELOVL4Q9GZR5 314 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 CXCL16Q9H2A7 254 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 SMYD3Q9H7B4 428 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ITGA11Q9UKX5 1188 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 TPX2Q9ULW0 747 aaKnown RBP14.06□□□□□ -0.16
TRIM60-201ENST00000341062 SHOC2Q9UQ13 582 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 TRPV2Q9Y5S1 764 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ACTL7BQ9Y614 415 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 PDCD11Q14690 1871 aaKnown RBP14.06□□□□□ -0.16
TRIM60-201ENST00000341062 MGEA5O60502 916 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 ERBB2P04626 1255 aa14.06□□□□□ -0.16
TRIM60-201ENST00000341062 KCNA4P22459 653 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms