RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 ISCUQ9H1K1 167 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 COPS7BQ9H9Q2 264 aaPredicted RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 GTF2A1LQ9UNN4 478 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 SLC12A8A0AV02 714 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 RGL2O15211 777 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 SUPT7LO94864 414 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 CPSF4O95639 269 aaKnown RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 EGFRP00533 1210 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 TCF3P15923 654 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 TARSP26639 723 aaKnown RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 NAMPTP43490 491 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 CAMK2GQ13555 558 aaPredicted RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 AGAP9Q5VTM2 703 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 EPS8L3Q8TE67 593 aaKnown RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 CASKIN2Q8WXE0 1202 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 MKNK1Q9BUB5 465 aa11.79□□□□□ -0.52
TNC-201ENST00000341037 UNKQ9C0B0 810 aaKnown RBP11.79□□□□□ -0.52
TNC-201ENST00000341037 TRPC5OSA6NMA1 111 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 MTSS1O43312 755 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CYP11B2P19099 503 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 KCNA3P22001 575 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CNTN1Q12860 1018 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TRIP10Q15642 601 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CACHD1Q5VU97 1274 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TRPM8Q7Z2W7 1104 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 VPS37AQ8NEZ2 397 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 MRPS31Q92665 395 aaKnown RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 APOL2Q9BQE5 337 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 STRNO43815 780 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 URODP06132 367 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CKMP06732 381 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 EPHX2P34913 555 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TMEM154Q6P9G4 183 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 C4orf22Q6V702 233 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CENPLQ8N0S6 344 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 RBBP8Q99708 897 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 OSBPL10Q9BXB5 764 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 OLFML3Q9NRN5 406 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 VPS28Q9UK41 221 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 DIP2AQ14689 1571 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 FOXN3O00409 490 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 VPS26AO75436 327 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ACADMP11310 421 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TTLL9Q3SXZ7 439 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 STN1Q9H668 368 aaKnown RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 PALMDQ9NP74 551 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 RPS6KL1Q9Y6S9 549 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ITSN1Q15811 1721 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 OGTO15294 1046 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 MAPK9P45984 424 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 NPTX2P47972 431 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 PHACTR4Q8IZ21 702 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ZSWIM1Q9BR11 485 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 SCN3BQ9NY72 215 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 POMCP01189 267 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 RHOCP08134 193 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ANKS6Q68DC2 871 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CAPRIN2Q6IMN6 1127 aaKnown RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TUBGCP3Q96CW5 907 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 NSL1Q96IY1 281 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 VDRP11473 427 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 RANBP1P43487 201 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 SERPINB8P50452 374 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 CYP51A1Q16850 503 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 TIGD7Q6NT04 549 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 SLC47A2Q86VL8 602 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 PACSIN1Q9BY11 444 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 VPS33BQ9H267 617 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
TNC-201ENST00000341037 AAR2Q9Y312 384 aaKnown RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 TIMM13Q9Y5L4 95 aaPredicted RBP11.78□□□□□ -0.52
TNC-201ENST00000341037 TSPAN3O60637 253 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 TFE3P19532 575 aaPredicted RBP11.77□□□□□ -0.52
TNC-201ENST00000341037 GPC1P35052 558 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 EPHB3P54753 998 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 AASDHQ4L235 1098 aaPredicted RBP11.77□□□□□ -0.52
TNC-201ENST00000341037 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.52
TNC-201ENST00000341037 CGRRF1Q99675 332 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 RRAGCQ9HB90 399 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.52
TNC-201ENST00000341037 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.52
TNC-201ENST00000341037 UBP1Q9NZI7 540 aa11.77□□□□□ -0.52
TNC-201ENST00000341037 CBX4O00257 560 aa11.77□□□□□ -0.53
TNC-201ENST00000341037 GAS2O43903 313 aaKnown RBP11.77□□□□□ -0.53
TNC-201ENST00000341037 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.53
TNC-201ENST00000341037 RASSF9O75901 435 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms