RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 PAIP2BQ9ULR5 123 aaKnown RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 TCRBV7S2A1N4TA0A589 114 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 ADRB2P07550 413 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 KCNA4P22459 653 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 OASLQ15646 514 aaKnown RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 PPHLN1Q8NEY8 458 aaKnown RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.38■□□□□ 0.051e-7■■□□□ 11.8
RRP1B-201ENST00000340648 TSR3Q9UJK0 312 aaKnown RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 CORO1CQ9ULV4 474 aaPredicted RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 UBA6A0AVT1 1052 aaPredicted RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 MAFGO15525 162 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 RASSF9O75901 435 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 PCYT1AP49585 367 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 ARPP19P56211 112 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 PDK1Q15118 436 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 C4orf22Q6V702 233 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 B4GALNT2Q8NHY0 566 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 PYDC1Q8WXC3 89 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 JADE3Q92613 823 aa15.38■□□□□ 0.05
RRP1B-201ENST00000340648 FAM193BQ96PV7 902 aaPredicted RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 SARS2Q9NP81 518 aaKnown RBP15.38■□□□□ 0.05
RRP1B-201ENST00000340648 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 LSM8O95777 96 aaKnown RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 SLURP2P0DP57 97 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 ATP6V1C1P21283 382 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 IFT43Q96FT9 208 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 MPP4Q96JB8 637 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 GFAPP14136 432 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 PSMC3P17980 439 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 PTGER2P43116 358 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 HSPA13P48723 471 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 UGP2Q16851 508 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 TWF2Q6IBS0 349 aaKnown RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 ZNF786Q8N393 782 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 FITM2Q8N6M3 262 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 GPRASP2Q96D09 838 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 AVPR1AP37288 418 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 GLRBP48167 497 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 RHBDL3P58872 404 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 TTLL4Q14679 1199 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 DCAF6Q58WW2 860 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 N4BP2L1Q5TBK1 243 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 FRA10AC1Q70Z53 315 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 ZFPM1Q8IX07 1006 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 MAGEC3Q8TD91 643 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 USP13Q92995 863 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 EPAS1Q99814 870 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 COG5Q9UP83 839 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 V9GYQ6 96 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 IL18RAPO95256 599 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 VIL1P09327 827 aaKnown RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 RAG1P15918 1043 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 TFE3P19532 575 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 RIPK1Q13546 671 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 FAM172AQ8WUF8 416 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 DACT3Q96B18 629 aaPredicted RBP15.37■□□□□ 0.05
RRP1B-201ENST00000340648 TLCD1Q96CP7 247 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
RRP1B-201ENST00000340648 SDR42E2A6NKP2 422 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 FSCN2O14926 492 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 OGTO15294 1046 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 KDM1AO60341 852 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TTC33Q6PID6 262 aaPredicted RBP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 ARHGAP22Q7Z5H3 698 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 PALB2Q86YC2 1186 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CNDP1Q96KN2 507 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CEP19Q96LK0 163 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 MAGEB5Q9BZ81 275 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 DDX18Q9NVP1 670 aaKnown RBP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 ARHGEF38Q9NXL2 777 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TMX2Q9Y320 296 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TGM2P21980 687 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 HDAC4P56524 1084 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 KBTBD12Q3ZCT8 623 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 LIASO43766 372 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 SLC1A6P48664 564 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 BNIP1Q12981 228 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 DDI1Q8WTU0 396 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 VCPIP1Q96JH7 1222 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TNIP3Q96KP6 325 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 DDX50Q9BQ39 737 aaKnown RBP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 FHDC1Q9C0D6 1143 aaPredicted RBP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 PIH1D1Q9NWS0 290 aaKnown RBP15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 MGRN1O60291 552 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CPA3P15088 417 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 CYP3A7P24462 503 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 TTC27Q6P3X3 843 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 PCYOX1LQ8NBM8 494 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 RXFP2Q8WXD0 754 aa15.36■□□□□ 0.05
RRP1B-201ENST00000340648 OPTNQ96CV9 577 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms