RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TTC31Q49AM3 519 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 UNC93AQ86WB7 457 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 KCNK18Q7Z418 384 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 TM4SF4P48230 202 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 KLK7P49862 253 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 SERPINA13PQ6UXR4 307 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 LATS2Q9NRM7 1088 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 NDRG2Q9UN36 371 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 MEI4A8MW99 385 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.275e-7■■■■■ 29.3
LIN54-201ENST00000340417 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 ARSEP51690 589 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 YWHAZP63104 245 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 MTFR1Q15390 333 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 SDHAF4Q5VUM1 108 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 TGS1Q96RS0 853 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 TMEM161AQ9NX61 479 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 PACSIN2Q9UNF0 486 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 KRT37O76014 449 aa13.33□□□□□ -0.27
LIN54-201ENST00000340417 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.27
LIN54-201ENST00000340417 DDR2Q16832 855 aa13.33□□□□□ -0.27
LIN54-201ENST00000340417 RNF135Q8IUD6 432 aa13.33□□□□□ -0.27
LIN54-201ENST00000340417 C18orf25Q96B23 403 aaPredicted RBP13.33□□□□□ -0.27
LIN54-201ENST00000340417 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.27
LIN54-201ENST00000340417 ULBP1Q9BZM6 244 aa13.33□□□□□ -0.27
LIN54-201ENST00000340417 AGPAT5Q9NUQ2 364 aa13.33□□□□□ -0.27
LIN54-201ENST00000340417 TISP43B9A030 160 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 PMPCBO75439 489 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 RARGP13631 454 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 PSEN1P49768 467 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 SYCP2LQ5T4T6 812 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 PIK3R5Q8WYR1 880 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 RAMP2O60895 175 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 IRX4P78413 519 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 GTF2BQ00403 316 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 DHX9Q08211 1270 aaKnown RBP13.33□□□□□ -0.28
LIN54-201ENST00000340417 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
LIN54-201ENST00000340417 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 RNF217Q8TC41 542 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 TFB1MQ8WVM0 346 aaKnown RBP13.33□□□□□ -0.28
LIN54-201ENST00000340417 VPS11Q9H270 941 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 SNX24Q9Y343 169 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 BTAF1O14981 1849 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 C2orf81A6NN90 581 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 PAEPP09466 180 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 B3GALNT2Q8NCR0 500 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 SPATA18Q8TC71 538 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 SPPL2BQ8TCT7 592 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 PPP1R16AQ96I34 528 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 ANXA9O76027 345 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 APRTP07741 180 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 RENBPP51606 427 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 FASTKD1Q53R41 847 aaKnown RBP13.33□□□□□ -0.28
LIN54-201ENST00000340417 RXFP2Q8WXD0 754 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 MCRS1Q96EZ8 462 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 FMO2Q99518 471 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
LIN54-201ENST00000340417 A0A1B0GTH6 734 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 TTI1O43156 1089 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 NCK2O43639 380 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 RNF40O75150 1001 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 LTFP02788 710 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 PTPN2P17706 415 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
LIN54-201ENST00000340417 NAB2Q15742 525 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 PRR23CQ6ZRP0 262 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 TRIM42Q8IWZ5 723 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 CHPFQ8IZ52 775 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 LRRC8CQ8TDW0 803 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 AP4E1Q9UPM8 1137 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 IGSF6O95976 241 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 CHRNA3P32297 505 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 TUBP50607 506 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 ING5Q8WYH8 240 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 ARHGEF26Q96DR7 871 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 BBS2Q9BXC9 721 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 OSGEPL1Q9H4B0 414 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 KRT38O76015 456 aa13.32□□□□□ -0.28
LIN54-201ENST00000340417 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms