RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ZWINTO95229 277 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PSMG1O95456 288 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 SP2Q02086 613 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 C1QBPQ07021 282 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 WASHC2DQ5SRD0 308 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 LRRC74BQ6ZQY2 392 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 USP37Q86T82 979 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ATP11CQ8NB49 1132 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 B4GALNT2Q8NHY0 566 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 TSC22D3Q99576 134 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 PAPOLBQ9NRJ5 636 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
CCDC144CP-201ENST00000340196 TCRBV5S1A1TA0A578 114 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 TRAFD1O14545 582 aaPredicted RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 ATP2A1O14983 1001 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CCDC22O60826 627 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 MT-ND3P03897 115 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 NR3C2P08235 984 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 ESRRAP11474 423 aaPredicted RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CD19P15391 556 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 GARTP22102 1010 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 JAK3P52333 1124 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CDH8P55286 799 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 POLE2P56282 527 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 BPIFB4P59827 614 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 KRT76Q01546 638 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 EMC2Q15006 297 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 TSNAXIP1Q2TAA8 658 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 PPP1R15BQ5SWA1 713 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC17A6Q9P2U8 582 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 NXF1Q9UBU9 619 aaKnown RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC24A2Q9UI40 661 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 POLIQ9UNA4 740 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 GRAP2O75791 330 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 ITGAVP06756 1048 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 LMNB2Q03252 620 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 ARID3BQ8IVW6 561 aaPredicted RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 USP6NLQ92738 828 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 NSL1Q96IY1 281 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 MMP19Q99542 508 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 TLE6Q9H808 572 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CISHQ9NSE2 258 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CHCHD3Q9NX63 227 aaKnown RBP12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 LNPEPQ9UIQ6 1025 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
CCDC144CP-201ENST00000340196 E2F8A0AVK6 867 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ACADSP16219 412 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 KCNA2P16389 499 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 VHLP40337 213 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ETV4P43268 484 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ACTR2P61160 394 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 SNRPFP62306 86 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 CDK16Q00536 496 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC25A11Q02978 314 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 RASA2Q15283 850 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 RFX6Q8HWS3 928 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 NETO2Q8NC67 525 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 NKD2Q969F2 451 aaPredicted RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 OXNAD1Q96HP4 312 aaPredicted RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 TTC1Q99614 292 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 EBF4Q9BQW3 602 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PDLIM7Q9NR12 457 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PIH1D1Q9NWS0 290 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 SENP1Q9P0U3 644 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 B2RBV5 119 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 K7ERI5 159 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ZC3H11AO75152 810 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ALDH18A1P54886 795 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PEX6Q13608 980 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PRKD1Q15139 912 aaPredicted RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 CDO1Q16878 200 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PRAMEF18Q5VWM3 479 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 OR52E8Q6IFG1 317 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 RBM15BQ8NDT2 890 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 RNF146Q9NTX7 359 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 GPATCH2LQ9NWQ4 482 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 STOML1Q9UBI4 398 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 PPARGC1AQ9UBK2 798 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 NFASCO94856 1347 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 DNAH12Q6ZR08 3092 aa12.48□□□□□ -0.41
CCDC144CP-201ENST00000340196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms