RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 TTYH3Q9C0H2 523 aa15.28■□□□□ 0.04
RET-201ENST00000340058 KCND1Q9NSA2 647 aa15.28■□□□□ 0.04
RET-201ENST00000340058 HACD3Q9P035 362 aa15.28■□□□□ 0.04
RET-201ENST00000340058 LCMT1Q9UIC8 334 aa15.28■□□□□ 0.04
RET-201ENST00000340058 USP2O75604 605 aaPredicted RBP15.28■□□□□ 0.04
RET-201ENST00000340058 FARP2O94887 1054 aaPredicted RBP15.28■□□□□ 0.04
RET-201ENST00000340058 GLRBP48167 497 aa15.28■□□□□ 0.04
RET-201ENST00000340058 BMT2Q1RMZ1 405 aa15.28■□□□□ 0.04
RET-201ENST00000340058 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
RET-201ENST00000340058 TSPAN3O60637 253 aa15.28■□□□□ 0.04
RET-201ENST00000340058 SNRPAP09012 282 aaKnown RBP15.28■□□□□ 0.04
RET-201ENST00000340058 KCNA2P16389 499 aa15.28■□□□□ 0.04
RET-201ENST00000340058 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
RET-201ENST00000340058 KDM7AQ6ZMT4 941 aa15.28■□□□□ 0.04
RET-201ENST00000340058 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.28■□□□□ 0.04
RET-201ENST00000340058 SLC9A9Q8IVB4 645 aa15.28■□□□□ 0.04
RET-201ENST00000340058 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
RET-201ENST00000340058 LPPQ93052 612 aa15.28■□□□□ 0.04
RET-201ENST00000340058 VCXQ9H320 206 aa15.28■□□□□ 0.04
RET-201ENST00000340058 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
RET-201ENST00000340058 MAP2K7O14733 419 aa15.28■□□□□ 0.04
RET-201ENST00000340058 ELK3P41970 407 aa15.28■□□□□ 0.04
RET-201ENST00000340058 ACADSBP45954 432 aa15.28■□□□□ 0.04
RET-201ENST00000340058 BCAT1P54687 386 aa15.28■□□□□ 0.04
RET-201ENST00000340058 VCPP55072 806 aaKnown RBP15.28■□□□□ 0.04
RET-201ENST00000340058 STX3Q13277 289 aa15.28■□□□□ 0.04
RET-201ENST00000340058 MFSD10Q14728 455 aa15.28■□□□□ 0.04
RET-201ENST00000340058 SLC27A1Q6PCB7 646 aa15.28■□□□□ 0.04
RET-201ENST00000340058 TFB1MQ8WVM0 346 aaKnown RBP15.28■□□□□ 0.04
RET-201ENST00000340058 CAVIN3Q969G5 261 aa15.28■□□□□ 0.04
RET-201ENST00000340058 TASP1Q9H6P5 420 aa15.28■□□□□ 0.04
RET-201ENST00000340058 SYNPO2Q9UMS6 1093 aa15.28■□□□□ 0.04
RET-201ENST00000340058 S100BP04271 92 aaPredicted RBP15.27■□□□□ 0.04
RET-201ENST00000340058 MCF2P10911 925 aa15.27■□□□□ 0.04
RET-201ENST00000340058 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.04
RET-201ENST00000340058 TTMPQ5BVD1 217 aa15.27■□□□□ 0.04
RET-201ENST00000340058 RASIP1Q5U651 963 aa15.27■□□□□ 0.04
RET-201ENST00000340058 TFAP2DQ7Z6R9 452 aa15.27■□□□□ 0.04
RET-201ENST00000340058 DEFB106AQ8N104 65 aa15.27■□□□□ 0.04
RET-201ENST00000340058 TTC8Q8TAM2 541 aa15.27■□□□□ 0.04
RET-201ENST00000340058 RPRD1AQ96P16 312 aaPredicted RBP15.27■□□□□ 0.04
RET-201ENST00000340058 GBP5Q96PP8 586 aa15.27■□□□□ 0.04
RET-201ENST00000340058 VPS33BQ9H267 617 aa15.27■□□□□ 0.04
RET-201ENST00000340058 KLC4Q9NSK0 619 aa15.27■□□□□ 0.04
RET-201ENST00000340058 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.27■□□□□ 0.04
RET-201ENST00000340058 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.04
RET-201ENST00000340058 RIPK2O43353 540 aa15.27■□□□□ 0.03
RET-201ENST00000340058 STRNO43815 780 aa15.27■□□□□ 0.03
RET-201ENST00000340058 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.03
RET-201ENST00000340058 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.03
RET-201ENST00000340058 CYP2F1P24903 491 aa15.27■□□□□ 0.03
RET-201ENST00000340058 STIP1P31948 543 aaKnown RBP15.27■□□□□ 0.03
RET-201ENST00000340058 CRADDP78560 199 aa15.27■□□□□ 0.03
RET-201ENST00000340058 DEFB128Q7Z7B8 93 aa15.27■□□□□ 0.03
RET-201ENST00000340058 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.03
RET-201ENST00000340058 LRGUKQ96M69 825 aa15.27■□□□□ 0.03
RET-201ENST00000340058 PAFAH2Q99487 392 aa15.27■□□□□ 0.03
RET-201ENST00000340058 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.03
RET-201ENST00000340058 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.03
RET-201ENST00000340058 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.03
RET-201ENST00000340058 KNL1Q8NG31 2342 aa15.27■□□□□ 0.03
RET-201ENST00000340058 CNTRLQ7Z7A1 2325 aa15.27■□□□□ 0.03
RET-201ENST00000340058 RGPD5Q99666 1765 aa15.27■□□□□ 0.03
RET-201ENST00000340058 PRRG1O14668 218 aa15.27■□□□□ 0.03
RET-201ENST00000340058 MAFO75444 373 aaPredicted RBP15.27■□□□□ 0.03
RET-201ENST00000340058 DNAJB2P25686 324 aa15.27■□□□□ 0.03
RET-201ENST00000340058 AVPR1AP37288 418 aa15.27■□□□□ 0.03
RET-201ENST00000340058 GEMIN4P57678 1058 aaKnown RBP15.27■□□□□ 0.03
RET-201ENST00000340058 BIRC2Q13490 618 aa15.27■□□□□ 0.03
RET-201ENST00000340058 CHI3L2Q15782 390 aa15.27■□□□□ 0.03
RET-201ENST00000340058 TTC30BQ8N4P2 665 aa15.27■□□□□ 0.03
RET-201ENST00000340058 SENP1Q9P0U3 644 aa15.27■□□□□ 0.03
RET-201ENST00000340058 COG5Q9UP83 839 aa15.27■□□□□ 0.03
RET-201ENST00000340058 FOXO6A8MYZ6 492 aa15.26■□□□□ 0.03
RET-201ENST00000340058 KPNA7A9QM74 516 aa15.26■□□□□ 0.03
RET-201ENST00000340058 EFEMP1Q12805 493 aa15.26■□□□□ 0.03
RET-201ENST00000340058 WSCD1Q658N2 575 aa15.26■□□□□ 0.03
RET-201ENST00000340058 PIP4K2CQ8TBX8 421 aa15.26■□□□□ 0.03
RET-201ENST00000340058 GTF3C2Q8WUA4 911 aaPredicted RBP15.26■□□□□ 0.03
RET-201ENST00000340058 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.26■□□□□ 0.03
RET-201ENST00000340058 SGSM3Q96HU1 749 aa15.26■□□□□ 0.03
RET-201ENST00000340058 SYT15Q9BQS2 421 aa15.26■□□□□ 0.03
RET-201ENST00000340058 B3GNT5Q9BYG0 378 aa15.26■□□□□ 0.03
RET-201ENST00000340058 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
RET-201ENST00000340058 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
RET-201ENST00000340058 OPLAHO14841 1288 aa15.26■□□□□ 0.03
RET-201ENST00000340058 DGKIO75912 1065 aa15.26■□□□□ 0.03
RET-201ENST00000340058 SYF2O95926 243 aaKnown RBP15.26■□□□□ 0.03
RET-201ENST00000340058 HMGCRP04035 888 aa15.26■□□□□ 0.03
RET-201ENST00000340058 GCKP35557 465 aa15.26■□□□□ 0.03
RET-201ENST00000340058 LRRC43Q8N309 656 aa15.26■□□□□ 0.03
RET-201ENST00000340058 N4BP2L2Q92802 583 aaPredicted RBP15.26■□□□□ 0.03
RET-201ENST00000340058 SPDL1Q96EA4 605 aa15.26■□□□□ 0.03
RET-201ENST00000340058 ADA2Q9NZK5 511 aa15.26■□□□□ 0.03
RET-201ENST00000340058 KCNH4Q9UQ05 1017 aa15.26■□□□□ 0.03
RET-201ENST00000340058 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
RET-201ENST00000340058 LSM8O95777 96 aaKnown RBP15.26■□□□□ 0.03
RET-201ENST00000340058 SCNN1GP51170 649 aa15.26■□□□□ 0.03
RET-201ENST00000340058 CSE1LP55060 971 aaKnown RBP15.26■□□□□ 0.03
RET-201ENST00000340058 FCGRTP55899 365 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms