RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 KCNN4O15554 427 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 SFNP31947 248 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 MRPS35P82673 323 aaKnown RBP16.84■□□□□ 0.29
SCARB1-202ENST00000339570 EML3Q32P44 896 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 SAMD3Q8N6K7 520 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 ARFGAP1Q8N6T3 406 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 RBM15BQ8NDT2 890 aaKnown RBP16.84■□□□□ 0.29
SCARB1-202ENST00000339570 MCPH1Q8NEM0 835 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 ACSS3Q9H6R3 686 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.84■□□□□ 0.293e-8■□□□□ 10.2
SCARB1-202ENST00000339570 CYTH4Q9UIA0 394 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
SCARB1-202ENST00000339570 WFS1O76024 890 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 SLC25A3Q00325 362 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 SP2Q02086 613 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 BST1Q10588 318 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 ZNF699Q32M78 642 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 TRIM50Q86XT4 487 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 SLC7A3Q8WY07 619 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 TRIM4Q9C037 500 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 VCXQ9H320 206 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 KCNK13Q9HB14 408 aa16.84■□□□□ 0.29
SCARB1-202ENST00000339570 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.29
SCARB1-202ENST00000339570 CCND2P30279 289 aa16.83■□□□□ 0.29
SCARB1-202ENST00000339570 SLC34A1Q06495 639 aa16.83■□□□□ 0.29
SCARB1-202ENST00000339570 KLHL38Q2WGJ6 581 aa16.83■□□□□ 0.29
SCARB1-202ENST00000339570 NGRNQ9NPE2 291 aaKnown RBP16.83■□□□□ 0.29
SCARB1-202ENST00000339570 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.29
SCARB1-202ENST00000339570 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-202ENST00000339570 SMAPO00193 183 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 RGS20O76081 388 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CALB1P05937 261 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 FAM102AQ5T9C2 384 aaPredicted RBP16.83■□□□□ 0.28
SCARB1-202ENST00000339570 ADGRD1Q6QNK2 874 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 C15orf39Q6ZRI6 1047 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CCDC110Q8TBZ0 833 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 GBP5Q96PP8 586 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CPXM1Q96SM3 734 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CEP41Q9BYV8 373 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CEP350Q5VT06 3117 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 CNTNAP1P78357 1384 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 C10orf71Q711Q0 1435 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 IQANK1A0A1B0GTG1 560 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 PRR5-ARHGAP8B1AHC4 643 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 KDELR1P24390 212 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 HMGCS2P54868 508 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 ARHGAP8P85298 464 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 DPYSL3Q14195 570 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 NAT8LQ8N9F0 302 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 NLRP4Q96MN2 994 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 MAGEB5Q9BZ81 275 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 SLC38A10Q9HBR0 1119 aa16.83■□□□□ 0.28
SCARB1-202ENST00000339570 MIPP30301 263 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 HADHQ16836 314 aaKnown RBP16.82■□□□□ 0.28
SCARB1-202ENST00000339570 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
SCARB1-202ENST00000339570 TRIM72Q6ZMU5 477 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 RGS9BPQ6ZS82 235 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 HACE1Q8IYU2 909 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 GSTCDQ8NEC7 633 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 CYLDQ9NQC7 956 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 ARHGAP28Q9P2N2 729 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 OPHN1O60890 802 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 LYPLA2O95372 231 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 CNTN2Q02246 1040 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 RIPOR1Q6ZS17 1223 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 CEP128Q6ZU80 1094 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 TDRPQ86YL5 185 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 NDUFAF2Q8N183 169 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 SH3TC2Q8TF17 1288 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 TRAPPC12Q8WVT3 735 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 PTCD3Q96EY7 689 aaKnown RBP16.82■□□□□ 0.28
SCARB1-202ENST00000339570 FGD4Q96M96 766 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
SCARB1-202ENST00000339570 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
SCARB1-202ENST00000339570 ITGAVP06756 1048 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 DLDP09622 509 aaKnown RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 TRMT10BQ6PF06 316 aaKnown RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 SLC35B2Q8TB61 432 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 PIWIL1Q96J94 861 aaKnown RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 SH3GL3Q99963 347 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 ZC3H7BQ9UGR2 993 aaKnown RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 A0A0B4J269 797 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 CIB2O75838 187 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 GRIA1P42261 906 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 ROR1Q01973 937 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 CES4AQ5XG92 561 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 TMEM192Q8IY95 271 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 SLC26A7Q8TE54 656 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 QTRT2Q9H974 415 aaKnown RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 PPP1R1BQ9UD71 204 aaPredicted RBP16.81■□□□□ 0.28
SCARB1-202ENST00000339570 PPM1HQ9ULR3 514 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 INO80B-WBP1J3KQ70 363 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 PMM2O15305 246 aa16.81■□□□□ 0.28
SCARB1-202ENST00000339570 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.285e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms