RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FRYLO94915 3013 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
PRKN-201ENST00000338468 KANSL1LA0AUZ9 987 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 MED19A0JLT2 244 aaPredicted RBP16.18■□□□□ 0.18
PRKN-201ENST00000338468 ZNF840PA6NDX5 716 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 AVPR1AP37288 418 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 RAD23BP54727 409 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 TAF10Q12962 218 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
PRKN-201ENST00000338468 ZNF394Q53GI3 561 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 WDR44Q5JSH3 913 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 TPRG1Q6ZUI0 275 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 IRF2BP1Q8IU81 584 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 UBR7Q8N806 425 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 MLKLQ8NB16 471 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 PJA1Q8NG27 643 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 BPIFB1Q8TDL5 484 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 SHDQ96IW2 340 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 TRPC7Q9HCX4 862 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 TDP1Q9NUW8 608 aa16.18■□□□□ 0.18
PRKN-201ENST00000338468 PATJQ8NI35 1801 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 F5P12259 2224 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 FAM92AA1XBS5 289 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 HHLA1C9JL84 531 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 DPYSL4O14531 572 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 GNA14O95837 355 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
PRKN-201ENST00000338468 ADORA2BP29275 332 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 SLC5A3P53794 718 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 MAP3K7CLP57077 242 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 ZXDBP98169 803 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 LRMPQ12912 555 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 FZD5Q13467 585 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 CUL2Q13617 745 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 PUM1Q14671 1186 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKN-201ENST00000338468 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 PPP1R26Q5T8A7 1209 aaPredicted RBP16.17■□□□□ 0.18
PRKN-201ENST00000338468 CLEC20AQ6ZU45 233 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 YAF2Q8IY57 180 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 ARL14EPQ8N8R7 260 aaPredicted RBP16.17■□□□□ 0.18
PRKN-201ENST00000338468 GBP4Q96PP9 640 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 LTB4R2Q9NPC1 389 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 TRPM5Q9NZQ8 1165 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 SIT1Q9Y3P8 196 aa16.17■□□□□ 0.18
PRKN-201ENST00000338468 NCOR2Q9Y618 2525 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 TRAV19A0A0A6YYK7 116 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 P4HA2O15460 535 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 OLFM2O95897 454 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 TARSP26639 723 aaKnown RBP16.16■□□□□ 0.18
PRKN-201ENST00000338468 YWHAQP27348 245 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 PGFP49763 221 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 TNK2Q07912 1038 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 KCNH2Q12809 1159 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
PRKN-201ENST00000338468 ZNF77Q15935 545 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 GPRIN1Q7Z2K8 1008 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 KAT5Q92993 513 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 FAM83CQ9BQN1 747 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 RNF38Q9H0F5 515 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 FAM124BQ9H5Z6 455 aaPredicted RBP16.16■□□□□ 0.18
PRKN-201ENST00000338468 KIF9Q9HAQ2 790 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 GTSE1Q9NYZ3 720 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
PRKN-201ENST00000338468 CEP250Q9BV73 2442 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 RTN3O95197 1032 aaPredicted RBP16.15■□□□□ 0.18
PRKN-201ENST00000338468 OAS1P00973 400 aaKnown RBP16.15■□□□□ 0.18
PRKN-201ENST00000338468 CKMP06732 381 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 USP17L7P0C7H9 530 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 ZDHHC11BP0C7U3 371 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 FAM200BP0CF97 657 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 HDCP19113 662 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 SOX9P48436 509 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 PPP3CCP48454 512 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 USP4Q13107 963 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 OTOGLQ3ZCN5 2332 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 TTC39CQ8N584 583 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 RUBCNQ92622 972 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 FBXO32Q969P5 355 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 TMEM176AQ96HP8 235 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 CNOT6LQ96LI5 555 aaKnown RBP16.15■□□□□ 0.18
PRKN-201ENST00000338468 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
PRKN-201ENST00000338468 OSBPL6Q9BZF3 934 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 HPS4Q9NQG7 708 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 GKN1Q9NS71 199 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 ARHGAP26Q9UNA1 814 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 PIAS3Q9Y6X2 628 aa16.15■□□□□ 0.18
PRKN-201ENST00000338468 HELZP42694 1942 aaKnown RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 MIA3Q5JRA6 1907 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 OTOL1A6NHN0 477 aaPredicted RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 FAM170BA6NMN3 283 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 AFPP02771 609 aaKnown RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 TCF3P15923 654 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms