RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
PRIM1-201ENST00000338193 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
PRIM1-201ENST00000338193 SFXN1Q9H9B4 322 aa13.28□□□□□ -0.28
PRIM1-201ENST00000338193 DMAP1Q9NPF5 467 aaPredicted RBP13.28□□□□□ -0.28
PRIM1-201ENST00000338193 LUC7L2Q9Y383 392 aaKnown RBP13.28□□□□□ -0.28
PRIM1-201ENST00000338193 MOSPD3O75425 235 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 C1RP00736 705 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 LRG1P02750 347 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 FERP16591 822 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CDC25BP30305 580 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 PDE6CP51160 858 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 SLC5A3P53794 718 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CDR2Q01850 454 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 PLD1Q13393 1074 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CCDC149Q6ZUS6 474 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 BHLHA9Q7RTU4 235 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 DNAJB7Q7Z6W7 309 aaPredicted RBP13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CLEC4CQ8WTT0 213 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 SMG7Q92540 1137 aaKnown RBP13.27□□□□□ -0.29
PRIM1-201ENST00000338193 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CHP1Q99653 195 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 CORO1BQ9BR76 489 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 HAUS4Q9H6D7 363 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 DZANK1Q9NVP4 752 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 ZDHHC7Q9NXF8 308 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 ARHGAP20Q9P2F6 1191 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 KIAA1257Q9ULG3 409 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 MYO6Q9UM54 1294 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 MAGED2Q9UNF1 606 aaPredicted RBP13.27□□□□□ -0.29
PRIM1-201ENST00000338193 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 10.6
PRIM1-201ENST00000338193 DENND4CQ5VZ89 1909 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.29
PRIM1-201ENST00000338193 DDX3XO00571 662 aaKnown RBP eCLIP13.26□□□□□ -0.292e-30■■■■□ 20.5
PRIM1-201ENST00000338193 HOXA9P31269 272 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 PRKCIP41743 596 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 BCAT1P54687 386 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 NOMO3P69849 1222 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 BST2Q10589 180 aaKnown RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 STXBP5Q5T5C0 1151 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 SMRP1Q8NCR6 262 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 CMASQ8NFW8 434 aaPredicted RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 SLC30A5Q8TAD4 765 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 PSMG2Q969U7 264 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 PIWIL1Q96J94 861 aaKnown RBP13.26□□□□□ -0.29
PRIM1-201ENST00000338193 CPXM1Q96SM3 734 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 DNAJC7Q99615 494 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 AGPAT1Q99943 283 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
PRIM1-201ENST00000338193 AKR1B15C9JRZ8 316 aaPredicted RBP13.25□□□□□ -0.29
PRIM1-201ENST00000338193 XPO1O14980 1071 aaKnown RBP13.25□□□□□ -0.29
PRIM1-201ENST00000338193 TRIM66O15016 1216 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 ERBB2P04626 1255 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 HNRNPA1P09651 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
PRIM1-201ENST00000338193 PLA2G4AP47712 749 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
PRIM1-201ENST00000338193 TRIM14Q14142 442 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 PRSS36Q5K4E3 855 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 ING5Q8WYH8 240 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 SPATA17Q96L03 361 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 NMUR1Q9HB89 426 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 OSER1Q9NX31 292 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 CD207Q9UJ71 328 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 USP15Q9Y4E8 981 aaPredicted RBP13.25□□□□□ -0.29
PRIM1-201ENST00000338193 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
PRIM1-201ENST00000338193 E5RJQ4 531 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 TK2O00142 265 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 MBTPS2O43462 519 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 MED7O43513 233 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 HRO43593 1189 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 CYP1A1P04798 512 aaPredicted RBP13.24□□□□□ -0.29
PRIM1-201ENST00000338193 RHOP08100 348 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 MYL4P12829 197 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 UNGP13051 313 aaPredicted RBP13.24□□□□□ -0.29
PRIM1-201ENST00000338193 LCP1P13796 627 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 CEBPBP17676 345 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 HNRNPH3P31942 346 aaKnown RBP13.24□□□□□ -0.29
PRIM1-201ENST00000338193 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
PRIM1-201ENST00000338193 EPHB3P54753 998 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 BPIFB4P59827 614 aa13.24□□□□□ -0.29
PRIM1-201ENST00000338193 CYP4F8P98187 520 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms