RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 POMKQ9H5K3 350 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 TMEM30AQ9NV96 361 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 IL37Q9NZH6 218 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 ZFP37Q9Y6Q3 630 aaPredicted RBP12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 CLUHO75153 1309 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 TRANK1O15050 2925 aa12.57□□□□□ -0.4
SPTLC1-202ENST00000337841 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 SOBPA7XYQ1 873 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 HHLA1C9JL84 531 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 F11P03951 625 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 CASP14P31944 242 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 GBP2P32456 591 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 GPD2P43304 727 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 ACADSBP45954 432 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 PLA2G4AP47712 749 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 KIF11P52732 1056 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 SLC5A3P53794 718 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 CDR2Q01850 454 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 IFRD2Q12894 506 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 TAF10Q12962 218 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 TAF3Q5VWG9 929 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 TRIM72Q6ZMU5 477 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 TMC6Q7Z403 805 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 IRF2BP2Q7Z5L9 587 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 SCAMP5Q8TAC9 235 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 FBXO32Q969P5 355 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 ZNHIT6Q9NWK9 470 aaKnown RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 CDH22Q9UJ99 828 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 USTQ9Y2C2 406 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 NR2E1Q9Y466 385 aa12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
SPTLC1-202ENST00000337841 A0A1W2PRU2 124 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 HAX1O00165 279 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 ABL1P00519 1130 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 RGS7P49802 495 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 KCNQ1P51787 676 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 TKTL1P51854 596 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 USP46P62068 366 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 KLHL30Q0D2K2 578 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 RAB41Q5JT25 222 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 PRSS36Q5K4E3 855 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 TMC8Q8IU68 726 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 SIX6OS1Q8N1H7 587 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 MSANTD4Q8NCY6 345 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 STKLD1Q8NE28 680 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 ITFG1Q8TB96 612 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 EPS8L1Q8TE68 723 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 OVCA2Q8WZ82 227 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 DDX1Q92499 740 aaKnown RBP12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 AGPAT1Q99943 283 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 MIS12Q9H081 205 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 GDE1Q9NZC3 331 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 PRKAG3Q9UGI9 489 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
SPTLC1-202ENST00000337841 TSC2P49815 1807 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 FAM92AA1XBS5 289 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 AKR1B15C9JRZ8 316 aaPredicted RBP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 TULP2O00295 520 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 FBXO21O94952 628 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 ADCY5O95622 1261 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 LSM8O95777 96 aaKnown RBP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 ZBED1O96006 694 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 GYPCP04921 128 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 MMEP08473 750 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 CFHP08603 1231 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 BMP1P13497 986 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 LCP1P13796 627 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 IL9P15248 144 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 CCR2P41597 374 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 PRKCIP41743 596 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 PSEN1P49768 467 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 TEAD2Q15562 447 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 GPR158Q5T848 1215 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms