RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SOX11P35716 441 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 DEUP1Q05D60 604 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 LAMB3Q13751 1172 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 LAMC2Q13753 1193 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 ZCWPW2Q504Y3 356 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 MPZL3Q6UWV2 235 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 FAM43BQ6ZT52 329 aaPredicted RBP6.75□□□□□ -1.33
HMG20A-201ENST00000336216 RCOR2Q8IZ40 523 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 MCOLN2Q8IZK6 566 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 STK32AQ8WU08 396 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 CKAP2Q8WWK9 683 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 KLRG1Q96E93 195 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 MRIQ9BWK5 157 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 UNKQ9C0B0 810 aaKnown RBP6.75□□□□□ -1.33
HMG20A-201ENST00000336216 IFT122Q9HBG6 1241 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 PRDM5Q9NQX1 630 aaPredicted RBP6.75□□□□□ -1.33
HMG20A-201ENST00000336216 NINJ2Q9NZG7 142 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 CPSF3Q9UKF6 684 aaKnown RBP6.75□□□□□ -1.33
HMG20A-201ENST00000336216 UBIAD1Q9Y5Z9 338 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 ZNF541Q9H0D2 1346 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 C4AP0C0L4 1744 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 DOCK2Q92608 1830 aa6.75□□□□□ -1.33
HMG20A-201ENST00000336216 SRRM3A6NNA2 597 aaPredicted RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PIK3CDO00329 1044 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 KIF3CO14782 793 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 P4HA2O15460 535 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 DDX3YO15523 660 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 LPXNO60711 386 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 BANF1O75531 89 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 KRT36O76013 467 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 POMCP01189 267 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CPB1P15086 417 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 TYK2P29597 1187 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 GRIK1P39086 918 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 THPOP40225 353 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SLC1A1P43005 524 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 NDST1P52848 882 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ATXN3P54252 364 aaPredicted RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 TMED1Q13445 227 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CUL3Q13618 768 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ZNF268Q14587 947 aaPredicted RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PCSK7Q16549 785 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ZDHHC24Q6UX98 284 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 RGS9BPQ6ZS82 235 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ABRAQ8N0Z2 381 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 TTC13Q8NBP0 860 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 FAM13CQ8NE31 585 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 REPS2Q8NFH8 660 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 RXFP2Q8WXD0 754 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 EDEM1Q92611 657 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 HDAC11Q96DB2 347 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 MAGEB18Q96M61 343 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CCDC68Q9H2F9 335 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 RRAGCQ9HB90 399 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 TMEM59LQ9UK28 342 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SLC12A4Q9UP95 1085 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CHD4Q14839 1912 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 IGKV6D-41A0A0C4DH26 115 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 C2orf71A6NGG8 1288 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 LACTBL1A8MY62 500 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SCAMP3O14828 347 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 MAGEB2O15479 319 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 GZMAP12544 262 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SULT1E1P49888 294 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CACNA2D1P54289 1103 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ALDH18A1P54886 795 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 BTKQ06187 659 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 BNIP1Q12981 228 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PIGHQ14442 188 aaPredicted RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 STAT4Q14765 748 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 KPNB1Q14974 876 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 NFIL3Q16649 462 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 C15orf59Q2T9L4 293 aaPredicted RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 ARL13BQ3SXY8 428 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 COBLL1Q53SF7 1204 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 C11orf63Q6NUN7 778 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 XRRA1Q6P2D8 792 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 MAP4K3Q8IVH8 894 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CEP70Q8NHQ1 597 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 MIPOL1Q8TD10 442 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SCG3Q8WXD2 468 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 LENG9Q96B70 501 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PABPC5Q96DU9 382 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 KREMEN1Q96MU8 473 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PCDHB18PQ96TA0 734 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 SARS2Q9NP81 518 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 RHBDL2Q9NX52 303 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 DNPEPQ9ULA0 475 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 STAP1Q9ULZ2 295 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 DUOX1Q9NRD9 1551 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 NID2Q14112 1375 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 IQANK1A0A1B0GTG1 560 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CCDC189A1A4V9 331 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 GTPBP10A4D1E9 387 aaKnown RBP6.74□□□□□ -1.33
HMG20A-201ENST00000336216 CES2O00748 559 aa6.74□□□□□ -1.33
HMG20A-201ENST00000336216 APOL1O14791 398 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms