RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OASLQ15646 514 aaKnown RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 DNAL1Q4LDG9 190 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 PLEKHA7Q6IQ23 1121 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 MICALL2Q8IY33 904 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 GPD1LQ8N335 351 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 NME8Q8N427 588 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 TMEM161BQ8NDZ6 487 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 WWP1Q9H0M0 922 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 TCRBV7S3A2A0A539 114 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 CST8O60676 142 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 ITGAVP06756 1048 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 KCNT1Q5JUK3 1230 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 DRICH1Q6PGQ1 229 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 RAPH1Q70E73 1250 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 hCG_1818297A0A087WSY0 165 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 TRIM49D1C9J1S8 452 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 SERPINB6P35237 376 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 RPL22P35268 128 aaKnown RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 ELK3P41970 407 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 GMPSP49915 693 aaPredicted RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 IRX4P78413 519 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 BST1Q10588 318 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 CHI3L2Q15782 390 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 CFAP36Q96G28 342 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 MFSD14AQ96MC6 490 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 DDX43Q9NXZ2 648 aaKnown RBP14.32□□□□□ -0.12
SYNE3-201ENST00000334258 CLIC5Q9NZA1 410 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 SNCAIPQ9Y6H5 919 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 COMMD3-BMI1R4GMX3 469 aa14.32□□□□□ -0.12
SYNE3-201ENST00000334258 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 PRR5-ARHGAP8B1AHC4 643 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
SYNE3-201ENST00000334258 GTF2H1P32780 548 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ARHGAP8P85298 464 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 HIC1Q14526 733 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF394Q53GI3 561 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 LPCAT4Q643R3 524 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ISLR2Q6UXK2 745 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 TSHZ1Q6ZSZ6 1077 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 CRLF3Q8IUI8 442 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 FAM71DQ8N9W8 422 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 OR6Y1Q8NGX8 325 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 NKD2Q969F2 451 aaPredicted RBP14.31□□□□□ -0.12
SYNE3-201ENST00000334258 E2F7Q96AV8 911 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 KCNK4Q9NYG8 393 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 TNS1Q9HBL0 1735 aaKnown RBP14.31□□□□□ -0.12
SYNE3-201ENST00000334258 NRXN2Q9P2S2 1712 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 FAM155BO75949 473 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ACOT2P49753 483 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 MPP3Q13368 585 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 MMEL1Q495T6 779 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ATG16L1Q676U5 607 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 TATDN1Q6P1N9 297 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 SPATA24Q86W54 205 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 NUDCD3Q8IVD9 361 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF341Q9BYN7 854 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 ARHGEF4Q9NR80 690 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 STRIP2Q9ULQ0 834 aa14.31□□□□□ -0.12
SYNE3-201ENST00000334258 TCRBV9S1A1TA0A576 114 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 TMEM63AO94886 807 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 HMGB2P26583 209 aaKnown RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 NRLP54845 237 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 NCKAP1LP55160 1127 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 SLC25A3Q00325 362 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 DEUP1Q05D60 604 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 UBAP2LQ14157 1087 aaKnown RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 UGCGQ16739 394 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 NBPF12Q5TAG4 269 aaPredicted RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 MZB1Q8WU39 189 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 SHCBP1LQ9BZQ2 653 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 ATXN10Q9UBB4 475 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 STK10O94804 968 aaKnown RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 WEE2P0C1S8 567 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CRABP2P29373 138 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 ETV4P43268 484 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 LDHDQ86WU2 507 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 ZNF516Q92618 1163 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 VCPIP1Q96JH7 1222 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 GMLQ99445 158 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 MIS12Q9H081 205 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 FETUBQ9UGM5 382 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 LRRC37AA6NMS7 1700 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CYB561D2O14569 222 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 PFDN1O60925 122 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CDKN2BP42772 138 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CD151P48509 253 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CNTNAP1P78357 1384 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
SYNE3-201ENST00000334258 CUL2Q13617 745 aa14.3□□□□□ -0.12
SYNE3-201ENST00000334258 GRAMD1BQ3KR37 738 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms