RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 PPP4R1Q8TF05 950 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 GRK7Q8WTQ7 553 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
LIMK2-202ENST00000333611 DMAC2Q9NW81 257 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 RREB1Q92766 1687 aa12.36□□□□□ -0.43
LIMK2-202ENST00000333611 J3QRK9 145 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 CFLARO15519 480 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SRGAP2CP0DJJ0 459 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SRGAP2BP0DMP2 458 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ARSEP51690 589 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 NCKAP1LP55160 1127 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ZBTB17Q13105 803 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 KIAA2013Q8IYS2 634 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 RBM15BQ8NDT2 890 aaKnown RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 FBXL13Q8NEE6 735 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 OSBPL8Q9BZF1 889 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 DCLK3Q9C098 648 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 RAB20Q9NX57 234 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SAE1Q9UBE0 346 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 STARD13Q9Y3M8 1113 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 TELO2Q9Y4R8 837 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 PORP16435 677 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 HDAC4P56524 1084 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SIX1Q15475 284 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 CRYGNQ8WXF5 182 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 WHRNQ9P202 907 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 KAT6AQ92794 2004 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 GIPC1O14908 333 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 KRT1P04264 644 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 CFHP08603 1231 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 RAG1P15918 1043 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 YWHABP31946 246 aaKnown RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ACOT2P49753 483 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 TAS2R40P59535 323 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 PDIA2Q13087 525 aaKnown RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 NR1H3Q13133 447 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 PEX6Q13608 980 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 HIC1Q14526 733 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 MYLK3Q32MK0 819 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 SPDYCQ5MJ68 293 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ZNF362Q5T0B9 420 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ACAD10Q6JQN1 1059 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ACAD11Q709F0 780 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 CCDC89Q8N998 374 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 C10orf82Q8WW14 230 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
LIMK2-202ENST00000333611 KMT5AQ9NQR1 393 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 ATAD3AQ9NVI7 634 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 NEU2Q9Y3R4 380 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
LIMK2-202ENST00000333611 GMNNO75496 209 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 UQCRBP14927 111 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ITGB5P18084 799 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 RELAQ04206 551 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 DGKZQ13574 1117 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 WDR44Q5JSH3 913 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 DPH6Q7L8W6 267 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 RNF148Q8N7C7 305 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 MKL1Q969V6 931 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 NFIBO00712 420 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 MYCLP1P12525 358 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 RARRES1P49788 294 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 GK3PQ14409 553 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 MAPK6Q16659 721 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 UGCGQ16739 394 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 SLC45A4Q5BKX6 768 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 PLEKHA7Q6IQ23 1121 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 MFSD5Q6N075 450 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 DCUN1D2Q6PH85 259 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 HEATR4Q86WZ0 1026 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 CLVS1Q8IUQ0 354 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 CAPSLQ8WWF8 208 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 Q9H521 79 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 LRRC19Q9H756 370 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 FBXO9Q9UK97 447 aaPredicted RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
LIMK2-202ENST00000333611 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
LIMK2-202ENST00000333611 STRNO43815 780 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms