RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PIWIL1Q96J94 861 aaKnown RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 DHRS4Q9BTZ2 278 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 MECRQ9BV79 373 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-201ENST00000333371 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 ARMCX1Q9P291 453 aa12.88□□□□□ -0.35
VPS33B-201ENST00000333371 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 SIGLEC16A6NMB1 481 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TOM1L1O75674 476 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 WFS1O76024 890 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 NEFHP12036 1026 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 YWHAGP61981 247 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 DPYSL3Q14195 570 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 CDO1Q16878 200 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 SGSM1Q2NKQ1 1148 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TSSK1BQ9BXA7 367 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 KCNK13Q9HB14 408 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 CENPFP49454 3210 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 MCM3APO60318 1980 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 KIF1CO43896 1103 aaKnown RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 MT-ND3P03897 115 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 PTPN4P29074 926 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 CPA2P48052 419 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 PTDSS1P48651 473 aaKnown RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 STAT5BP51692 787 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 UBA3Q8TBC4 463 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 CFAP36Q96G28 342 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 NIFKQ9BYG3 293 aaKnown RBP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 TMEM134Q9H6X4 195 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 SMYD3Q9H7B4 428 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 BTBD7Q9P203 1132 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
VPS33B-201ENST00000333371 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS33B-201ENST00000333371 E7ESA3 106 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ABLIM1O14639 778 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 SMNDC1O75940 238 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 PRKCBP05771 671 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CXCL8P10145 99 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TROVE2P10155 538 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 POLNQ7Z5Q5 900 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 PCGF5Q86SE9 256 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 GPATCH2LQ9NWQ4 482 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 FAM237BA0A1B0GVD1 139 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 OGTO15294 1046 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 UGT1A9O60656 530 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 LAMTOR4Q0VGL1 99 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 KLHL38Q2WGJ6 581 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 DARS2Q6PI48 645 aaKnown RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 SPATC1LQ9H0A9 340 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 UGT1A7Q9HAW7 530 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 UGT1A10Q9HAW8 530 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 UGT1A8Q9HAW9 530 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CCDC195A0A1B0GUA6 201 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CXorf49A8MYA2 514 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 HAUS5O94927 633 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 KRT7P08729 469 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 PEX19P40855 299 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TUBP50607 506 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CCNG1P51959 295 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ARFIP2P53365 341 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 HADHQ16836 314 aaKnown RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CES4AQ5XG92 561 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ANO7Q6IWH7 933 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33B-201ENST00000333371 SIX4Q9UIU6 781 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 USP18Q9UMW8 372 aa12.86□□□□□ -0.35
VPS33B-201ENST00000333371 LOC285556D6RIA3 1793 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms