RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 GRAP2O75791 330 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 TCP1P17987 556 aaKnown RBP24.45■■□□□ 1.51
TSEN54-201ENST00000333213 SLC6A3Q01959 620 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 TAP1Q03518 808 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 ADCY1Q08828 1119 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 MAPRE1Q15691 268 aaKnown RBP24.45■■□□□ 1.51
TSEN54-201ENST00000333213 CC2D1AQ6P1N0 951 aaPredicted RBP24.45■■□□□ 1.51
TSEN54-201ENST00000333213 COLGALT1Q8NBJ5 622 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 HERVK_113Q902F9 699 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 ZNF558Q96NG5 402 aa24.45■■□□□ 1.51
TSEN54-201ENST00000333213 KCNK3O14649 394 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 PEX5P50542 639 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 SLC8A3P57103 927 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 RNASE9P60153 205 aaKnown RBP24.45■■□□□ 1.5
TSEN54-201ENST00000333213 ADIGQ0VDE8 80 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 ZNF280DQ6N043 979 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 CEP112Q8N8E3 955 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 ABHD8Q96I13 439 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 MS4A14Q96JA4 679 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 CHST7Q9NS84 486 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 SMARCAL1Q9NZC9 954 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 IP6K2Q9UHH9 426 aa24.45■■□□□ 1.5
TSEN54-201ENST00000333213 SPOPO43791 374 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 TCF4P15884 667 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 CYP2F1P24903 491 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 FLT3P36888 993 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 ACADSBP45954 432 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 BRD3Q15059 726 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 ARFGAP1Q8N6T3 406 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 CHD7Q9P2D1 2997 aa24.44■■□□□ 1.5
TSEN54-201ENST00000333213 CCDC151A5D8V7 595 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 TAS2R40P59535 323 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 RAB41Q5JT25 222 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 FNIP1Q8TF40 1166 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 PGLYRP2Q96PD5 576 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 KIAA1671Q9BY89 1806 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 OR6C75A6NL08 312 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 C2CD4BA6NLJ0 364 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 LAG3P18627 525 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 CTNNA1P35221 906 aaKnown RBP24.43■■□□□ 1.5
TSEN54-201ENST00000333213 SLC1A1P43005 524 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 USP41Q3LFD5 358 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 TEX35Q5T0J7 233 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 ZDHHC17Q8IUH5 632 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 SPATA2LQ8IUW3 424 aaPredicted RBP24.43■■□□□ 1.5
TSEN54-201ENST00000333213 DPF3Q92784 378 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 ARFGAP3Q9NP61 516 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 USTQ9Y2C2 406 aa24.43■■□□□ 1.5
TSEN54-201ENST00000333213 CDH23Q9H251 3354 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 ADAM12O43184 909 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 CAPN15O75808 1086 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 VNN2O95498 520 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 TKTL1P51854 596 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 WHAMMP3Q1A5X7 153 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 CFAP221Q4G0U5 840 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 C4orf50Q6ZRC1 276 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 ANKS3Q6ZW76 656 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 HERC6Q8IVU3 1022 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 DCP1BQ8IZD4 617 aaKnown RBP24.42■■□□□ 1.5
TSEN54-201ENST00000333213 NIPA2Q8N8Q9 360 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 ABI2Q9NYB9 513 aaPredicted RBP24.42■■□□□ 1.5
TSEN54-201ENST00000333213 PCDHA3Q9Y5H8 950 aa24.42■■□□□ 1.5
TSEN54-201ENST00000333213 MAN1A1P33908 653 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 TTC9BQ8N6N2 239 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 ATAD1Q8NBU5 361 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 HNRNPLLQ8WVV9 542 aaKnown RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 TMEM169Q96HH4 297 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 LRRC4Q9HBW1 653 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 DMAP1Q9NPF5 467 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 INSL6Q9Y581 213 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SLC4A7Q9Y6M7 1214 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 LCHNA4D1U4 455 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 MIF4GDA9UHW6 222 aaKnown RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SOD2P04179 222 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 PSMA2P25787 234 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 CTNNA2P26232 953 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 ARPP19P56211 112 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SNX16P57768 344 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 PIGHQ14442 188 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 RAB6CQ53S08 254 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SH3PXD2AQ5TCZ1 1133 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 AADACL2Q6P093 401 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SLC26A9Q7LBE3 791 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 RXFP2Q8WXD0 754 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 RIN2Q8WYP3 895 aaPredicted RBP24.41■■□□□ 1.5
TSEN54-201ENST00000333213 ZBED2Q9BTP6 218 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 RAB6CQ9H0N0 254 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 CRISPLD1Q9H336 500 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 SPG21Q9NZD8 308 aa24.41■■□□□ 1.5
TSEN54-201ENST00000333213 RPL17P18621 184 aaKnown RBP24.4■■□□□ 1.5
TSEN54-201ENST00000333213 MRPS5P82675 430 aaKnown RBP24.4■■□□□ 1.5
TSEN54-201ENST00000333213 NFE2Q16621 373 aaPredicted RBP24.4■■□□□ 1.5
TSEN54-201ENST00000333213 RNF19BQ6ZMZ0 732 aa24.4■■□□□ 1.5
TSEN54-201ENST00000333213 PIK3R5Q8WYR1 880 aa24.4■■□□□ 1.5
TSEN54-201ENST00000333213 ULBP1Q9BZM6 244 aa24.4■■□□□ 1.5
TSEN54-201ENST00000333213 MTRRQ9UBK8 725 aa24.4■■□□□ 1.5
TSEN54-201ENST00000333213 CDY1Q9Y6F8 540 aa24.4■■□□□ 1.5
TSEN54-201ENST00000333213 C2CD2LO14523 706 aa24.39■■□□□ 1.5
TSEN54-201ENST00000333213 TUBBP07437 444 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms