RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CNGA2Q16280 664 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 TMC3Q7Z5M5 1100 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 NT5DC4Q86YG4 428 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 DCP1BQ8IZD4 617 aaKnown RBP9.92□□□□□ -0.82
SS18L1-201ENST00000331758 RAB3IL1Q8TBN0 382 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 TJP2Q9UDY2 1190 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 COG5Q9UP83 839 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ALDH1A1P00352 501 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ZSCAN5DPP0CG00 497 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 KITP10721 976 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 SCNN1GP51170 649 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ASPHQ12797 758 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ANKRD23Q86SG2 305 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 CRYGNQ8WXF5 182 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ADAM2Q99965 735 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ROPN1BQ9BZX4 212 aaPredicted RBP9.92□□□□□ -0.82
SS18L1-201ENST00000331758 ROPN1Q9HAT0 212 aaPredicted RBP9.92□□□□□ -0.82
SS18L1-201ENST00000331758 PFDN6O15212 129 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 GPC4O75487 556 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 RPSAP08865 295 aaKnown RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 AXLP30530 894 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 FLT3LGP49771 235 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 COPS2P61201 443 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 ZNF200P98182 395 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 PTGISQ16647 500 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 ASTE1Q2TB18 679 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 FBXW10Q5XX13 1052 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SLFN11Q7Z7L1 901 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 MIB1Q86YT6 1006 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SKA2Q8WVK7 121 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SENP8Q96LD8 212 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 PSMC3IPQ9P2W1 217 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TELO2Q9Y4R8 837 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 ZMYM2Q9UBW7 1377 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TREHO43280 583 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SETSIPP0DME0 302 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SMPD1P17405 629 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TAS2R40P59535 323 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 PDK2Q15119 407 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 WSCD1Q658N2 575 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 ZNF473Q8WTR7 871 aaKnown RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 EXT2Q93063 718 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 VPS39Q96JC1 886 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 GOLGA2P5Q9HBQ8 144 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TRPV2Q9Y5S1 764 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 B4GALT4O60513 344 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 LHX1P48742 406 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 ATG16L1Q676U5 607 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 PRUNE1Q86TP1 453 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 LPPQ93052 612 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 C18orf25Q96B23 403 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 TMBIM4Q9HC24 238 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 SENP1Q9P0U3 644 aa9.91□□□□□ -0.82
SS18L1-201ENST00000331758 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 N4BP2Q86UW6 1770 aaPredicted RBP9.91□□□□□ -0.82
SS18L1-201ENST00000331758 C3orf70A6NLC5 250 aaPredicted RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 EDIL3O43854 480 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 YWHAZP63104 245 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 MAPRE1Q15691 268 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 TAF1BQ53T94 588 aaPredicted RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 OVOS1Q6IE37 1185 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 NUDCD3Q8IVD9 361 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 DEFB106AQ8N104 65 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 ATPAF2Q8N5M1 289 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 C1orf127Q8N9H9 656 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 CFAP61Q8NHU2 1237 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PLEKHO2Q8TD55 490 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 TFB1MQ8WVM0 346 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 IFT43Q96FT9 208 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 APBA2Q99767 749 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 CEP41Q9BYV8 373 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 C2CD2Q9Y426 696 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PCDHB7Q9Y5E2 793 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 COL22A1Q8NFW1 1626 aaPredicted RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 NAV1Q8NEY1 1877 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 FAM47DPA6NHR8 397 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 SIGLEC16A6NMB1 481 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 RGS20O76081 388 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 TTC4O95801 387 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 SKIP12755 728 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 CLNS1AP54105 237 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PTK7Q13308 1070 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 VEPH1Q14D04 833 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PWP2Q15269 919 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PHF13Q86YI8 300 aaPredicted RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 CRLF3Q8IUI8 442 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 FBXO36Q8NEA4 188 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 RAB3IPQ96QF0 476 aaPredicted RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 PPARGC1AQ9UBK2 798 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 LAMA4Q16363 1823 aa9.9□□□□□ -0.82
SS18L1-201ENST00000331758 XIRP1Q702N8 1843 aaKnown RBP9.9□□□□□ -0.82
SS18L1-201ENST00000331758 SESN3P58005 492 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms