RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 PPCSQ9HAB8 311 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 RAVER2Q9HCJ3 691 aaKnown RBP18.92■□□□□ 0.62
PKP3-201ENST00000331563 S100A14Q9HCY8 104 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 I3L4J1 428 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 TGDSO95455 350 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 EPHB1P54762 984 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 NCOA4Q13772 614 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 HIC1Q14526 733 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 PRKD1Q15139 912 aaPredicted RBP18.92■□□□□ 0.62
PKP3-201ENST00000331563 HIF1AQ16665 826 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 TMCO4Q5TGY1 634 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 TRIM67Q6ZTA4 783 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 GLT8D2Q9H1C3 349 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 GPAMQ9HCL2 828 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 STK24Q9Y6E0 443 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 IKBKGQ9Y6K9 419 aa18.92■□□□□ 0.62
PKP3-201ENST00000331563 TBC1D12O60347 775 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 CLPTM1O96005 669 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 POLR2MP0CAP2 368 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 ATP6V1B1P15313 513 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 PEX2P28328 305 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 ADSSP30520 456 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 HNRNPDQ14103 355 aaKnown RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 EFHC2Q5JST6 749 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 FKBP1CQ5VVH2 108 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 C1orf186Q6ZWK4 172 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 ALKBH8Q96BT7 664 aaKnown RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 CCDC124Q96CT7 223 aaKnown RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 POLR3CQ9BUI4 534 aaPredicted RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 RABGEF1Q9UJ41 708 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 CCPG1Q9ULG6 757 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 GPX6P59796 221 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 SPP2Q13103 211 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 C1orf228Q6PIY5 440 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 ARID3BQ8IVW6 561 aaPredicted RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 RHOT1Q8IXI2 618 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 PALM2Q8IXS6 379 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 DHX38Q92620 1227 aaKnown RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 FAM20AQ96MK3 541 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 NACA2Q9H009 215 aa18.91■□□□□ 0.62
PKP3-201ENST00000331563 TDRKHQ9Y2W6 561 aaKnown RBP18.91■□□□□ 0.62
PKP3-201ENST00000331563 K7ENM7 598 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 SGK1O00141 431 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 ARP10275 920 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 MORF4L2Q15014 288 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 ANGEL2Q5VTE6 544 aaKnown RBP18.9■□□□□ 0.62
PKP3-201ENST00000331563 ICA1LQ8NDH6 482 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 TRPM4Q8TD43 1214 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 ARPC5LQ9BPX5 153 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 COL20A1Q9P218 1284 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 IGLV3-22A0A075B6J6 115 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 C15orf38-AP3S2A0A0A6YYH1 394 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 TBX3O15119 743 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 PTGER2P43116 358 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 EFHC1Q5JVL4 640 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 LRRC8BQ6P9F7 803 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 KLHDC10Q6PID8 442 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 ARPINQ7Z6K5 226 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 PRPF31Q8WWY3 499 aaKnown RBP18.9■□□□□ 0.62
PKP3-201ENST00000331563 MBOAT7Q96N66 472 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 TRPV5Q9NQA5 729 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 FAIMQ9NVQ4 179 aa18.9■□□□□ 0.62
PKP3-201ENST00000331563 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.62
PKP3-201ENST00000331563 GOLGA8IPA6NC78 632 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GOLGA8JA6NMD2 632 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 E5RJQ4 531 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 P4HA2O15460 535 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 FOSP01100 380 aaPredicted RBP18.89■□□□□ 0.61
PKP3-201ENST00000331563 GLRA2P23416 452 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 NANOGNBQ7Z5D8 188 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 IL31RAQ8NI17 732 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.89■□□□□ 0.61
PKP3-201ENST00000331563 SHKBP1Q8TBC3 707 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 FNDC8Q8TC99 324 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 ACAP3Q96P50 834 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GCNAQ96QF7 691 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 CBWD1Q9BRT8 395 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 UTP6Q9NYH9 597 aaKnown RBP18.89■□□□□ 0.61
PKP3-201ENST00000331563 PLA2G4CQ9UP65 541 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 VILLO15195 856 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GTF2H1P32780 548 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 RPL5P46777 297 aaKnown RBP18.89■□□□□ 0.61
PKP3-201ENST00000331563 TAS2R40P59535 323 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 TMPRSS15P98073 1019 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 MSLNQ13421 630 aaPredicted RBP18.89■□□□□ 0.61
PKP3-201ENST00000331563 GRM2Q14416 872 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 KLHL38Q2WGJ6 581 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 ANKRD20A4Q4UJ75 823 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 KLHL35Q6PF15 583 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 RHPN2Q8IUC4 686 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 PIP4K2CQ8TBX8 421 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 SH2D3AQ9BRG2 576 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 GRIP2Q9C0E4 1043 aa18.89■□□□□ 0.61
PKP3-201ENST00000331563 SEL1LQ9UBV2 794 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms