RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CCT6BQ92526 530 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 LENG1Q96BZ8 264 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 KIF9Q9HAQ2 790 aa15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 GBA2Q9HCG7 927 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-201ENST00000331433 DOCK3Q8IZD9 2030 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 DYNC1LI2O43237 492 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 PIAS1O75925 651 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 GPX6P59796 221 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 ANKRD23Q86SG2 305 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 ANKS4BQ8N8V4 417 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 NAT8LQ8N9F0 302 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 SNX27Q96L92 541 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 APOL6Q9BWW8 343 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 FRMD8P1Q9BZ68 369 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 NXF3Q9H4D5 531 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 GPATCH2LQ9NWQ4 482 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 GJD2Q9UKL4 321 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 MCF2LO15068 1137 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 GPR32O75388 356 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 SPAG7O75391 227 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 TMEM63AO94886 807 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 DPYSL3Q14195 570 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 ZKSCAN8Q15776 578 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 CCDC14Q49A88 953 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 NUGGCQ68CJ6 796 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 SCYL2Q6P3W7 929 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 SLC27A1Q6PCB7 646 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 PLEKHH3Q7Z736 793 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 SCUBE3Q8IX30 993 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 CKAP2Q8WWK9 683 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 PTPN18Q99952 460 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 WDR83Q9BRX9 315 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 MAK16Q9BXY0 300 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 GCOM2Q9BZD3 368 aaPredicted RBP15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 RSAD1Q9HA92 442 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 KIAA1257Q9ULG3 409 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 CLUHO75153 1309 aa15.55■□□□□ 0.08
CLCNKA-201ENST00000331433 IQCA1LA6NCM1 817 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 PRPSAP2O60256 369 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SMIM10L2AP0DMW4 78 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SMIM10L2BP0DMW5 78 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 AKAP5P24588 427 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SSTR1P30872 391 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 STX2P32856 288 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 BASP1P80723 227 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SLC20A2Q08357 652 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 PKN2Q16513 984 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SYCP2LQ5T4T6 812 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 OLFML1Q6UWY5 402 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 PCGF5Q86SE9 256 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 TRABD2AQ86V40 505 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 RIBC1Q8N443 379 aaPredicted RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 B3GNT5Q9BYG0 378 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 DPEP3Q9H4B8 488 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 NGRNQ9NPE2 291 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 NKIRAS1Q9NYS0 192 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 CCT8L1PA6NM43 557 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 SNX3O60493 162 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 YARSP54577 528 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 EFTUD2Q15029 972 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 PKDCCQ504Y2 493 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 ZC3H12AQ5D1E8 599 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 IQSEC1Q6DN90 963 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 C1orf228Q6PIY5 440 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 TTC39CQ8N584 583 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 PLEKHA5Q9HAU0 1116 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 ACTL7BQ9Y614 415 aa15.54■□□□□ 0.08
CLCNKA-201ENST00000331433 GABBR2O75899 941 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ENDOD1O94919 500 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 KRT15P19012 456 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ARL4CP56559 192 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 HIC1Q14526 733 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ITIH4Q14624 930 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 DARS2Q6PI48 645 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ARHGEF18Q6ZSZ5 1173 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 PNMA8AQ86V59 439 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 C4orf33Q8N1A6 199 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 OR6B3Q8NGW1 331 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 PYROXD1Q8WU10 500 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 TGS1Q96RS0 853 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 PAIP2Q9BPZ3 127 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 MIS12Q9H081 205 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 RECQL4O94761 1208 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 MAP3K6O95382 1288 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 SCTRP47872 440 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ROR1Q01973 937 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 KRT81Q14533 505 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ZBTB6Q15916 424 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 TDRPQ86YL5 185 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 CNPY4Q8N129 248 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 C7orf31Q8N865 590 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 FBXO36Q8NEA4 188 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 P3H4Q92791 437 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 KHSRPQ92945 711 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 ACTR5Q9H9F9 607 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms