RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
VMA21-201ENST00000330374 PTPRJQ12913 1337 aa8.23□□□□□ -1.09
VMA21-201ENST00000330374 LOC100653049A0A140TA62 436 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TOM1L1O75674 476 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 KRT34O76011 436 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 GTF2H1P32780 548 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 LIG4P49917 911 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 SCNN1BP51168 640 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 NLRP11P59045 1033 aaKnown RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 ORC1Q13415 861 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZBTB41Q5SVQ8 909 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TDRD10Q5VZ19 366 aaKnown RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 USP37Q86T82 979 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 RSPH3Q86UC2 560 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PPIL6Q8IXY8 311 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ABRAQ8N0Z2 381 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 CCDC33Q8N5R6 958 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 GMCL1P1Q8NEA9 526 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PHF12Q96QT6 1004 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TUBB6Q9BUF5 446 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 FOXP3Q9BZS1 431 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ACSS3Q9H6R3 686 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 APOBEC3GQ9HC16 384 aaKnown RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 ETNK2Q9NVF9 386 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 RHBDL2Q9NX52 303 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 IP6K2Q9UHH9 426 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 SHOC2Q9UQ13 582 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 hCG_1818297A0A087WSY0 165 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 UGT1A9O60656 530 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZMPSTE24O75844 475 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ASPHQ12797 758 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PRKD1Q15139 912 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 SLC5A9Q2M3M2 681 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 GRAMD1BQ3KR37 738 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 CMPK2Q5EBM0 449 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TFDP3Q5H9I0 405 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 RALGPS1Q5JS13 557 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 HHIPL2Q6UWX4 724 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 NPNTQ6UXI9 565 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZFAND2BQ8WV99 257 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 IWS1Q96ST2 819 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 SPATA16Q9BXB7 569 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PHACTR1Q9C0D0 580 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 SCINQ9Y6U3 715 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ASTN2O75129 1339 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 IQANK1A0A1B0GTG1 560 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TCRBV9S1A1TA0A576 114 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PIK3R2O00459 728 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TM9SF1O15321 606 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 ATXN3P54252 364 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 GCNT1Q02742 428 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZNF252P-AS1Q0IIN9 211 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 DGKZQ13574 1117 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TBC1D25Q3MII6 688 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 LIN52Q52LA3 116 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 SATL1Q86VE3 508 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TMPRSS6Q8IU80 811 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 CENPKQ9BS16 269 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PCDH9Q9HC56 1237 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TJP2Q9UDY2 1190 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 COQ4Q9Y3A0 265 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TELO2Q9Y4R8 837 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 CREB3O43889 395 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 WEE2P0C1S8 567 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 PSMA2P25787 234 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 BPIFB4P59827 614 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 DYNC1I2Q13409 638 aaKnown RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 NR6A1Q15406 480 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TAF5Q15542 800 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 OASLQ15646 514 aaKnown RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 AOC3Q16853 763 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 TCHHL1Q5QJ38 904 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 OLFML2BQ68BL8 750 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 C12orf56Q8IXR9 622 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ST13P4Q8IZP2 240 aaPredicted RBP8.22□□□□□ -1.09
VMA21-201ENST00000330374 PRR7Q8TB68 274 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 ZNF398Q8TD17 642 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 VCX3BQ9H321 246 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 VCX3AQ9NNX9 186 aa8.22□□□□□ -1.09
VMA21-201ENST00000330374 LYPLA1O75608 230 aaPredicted RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 BTKQ06187 659 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 CUL2Q13617 745 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 TRIP10Q15642 601 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 MROH9Q5TGP6 573 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 MEX3CQ5U5Q3 659 aaKnown RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 APOPT1Q96IL0 206 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 RIT2Q99578 217 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 RPL26L1Q9UNX3 145 aaKnown RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 NUB1Q9Y5A7 615 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 CD19P15391 556 aa8.21□□□□□ -1.09
VMA21-201ENST00000330374 TAGLNQ01995 201 aaKnown RBP8.21□□□□□ -1.09
VMA21-201ENST00000330374 CRY2Q49AN0 593 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms