RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 F9P00740 461 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 ATXN3P54252 364 aaPredicted RBP15.97■□□□□ 0.15
PTPN21-201ENST00000328736 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
PTPN21-201ENST00000328736 ACAD10Q6JQN1 1059 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 MAP3K14Q99558 947 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 WDR41Q9HAD4 459 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 PRR23AA6NEV1 266 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 PMPCBO75439 489 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 AP1G2O75843 785 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 FDPSP14324 419 aaKnown RBP15.97■□□□□ 0.15
PTPN21-201ENST00000328736 ITGALP20701 1170 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTPN21-201ENST00000328736 EPC2Q52LR7 807 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 IRAK1BP1Q5VVH5 260 aa15.97■□□□□ 0.15
PTPN21-201ENST00000328736 ZW10O43264 779 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 SYNCRIPO60506 623 aaKnown RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 URODP06132 367 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PDHBP11177 359 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CCND1P24385 295 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CUL2Q13617 745 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 LAYNQ6UX15 382 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CASP10Q92851 521 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 L3MBTL3Q96JM7 780 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 ARMC7Q9H6L4 198 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 NFIBO00712 420 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 RPA1P27694 616 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 RANBP1P43487 201 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PDK2Q15119 407 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CCDC81Q6ZN84 652 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 OTOAQ7RTW8 1153 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CDK5RAP1Q96SZ6 601 aaKnown RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PI4K2AQ9BTU6 479 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 DRG1Q9Y295 367 aaKnown RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 COILP38432 576 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 KPNA1P52294 538 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 COPAP53621 1224 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 ALFQ53S48 1182 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 MROH9Q5TGP6 573 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PHACTR4Q8IZ21 702 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PNKPQ96T60 521 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 PNMA8BQ9ULN7 279 aaPredicted RBP15.96■□□□□ 0.15
PTPN21-201ENST00000328736 TBX20Q9UMR3 447 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 GTF2A1LQ9UNN4 478 aa15.96■□□□□ 0.15
PTPN21-201ENST00000328736 CRTAMO95727 393 aa15.96■□□□□ 0.14
PTPN21-201ENST00000328736 EPHB3P54753 998 aa15.96■□□□□ 0.14
PTPN21-201ENST00000328736 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
PTPN21-201ENST00000328736 RIN3Q8TB24 985 aa15.96■□□□□ 0.14
PTPN21-201ENST00000328736 NFKBIZQ9BYH8 718 aa15.96■□□□□ 0.14
PTPN21-201ENST00000328736 RFX3P48380 749 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 GMPSP49915 693 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TRAF7Q6Q0C0 670 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 NLRP9Q7RTR0 991 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TRPM8Q7Z2W7 1104 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 ZNF512BQ96KM6 892 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 V9GYQ6 96 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 CPS1P31327 1500 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TMEM120BA0PK00 339 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 PDIA6Q15084 440 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 PKN2Q16513 984 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 DENND1BQ6P3S1 775 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 C3orf20Q8ND61 904 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 CLPBQ9H078 707 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 KCTD10Q9H3F6 313 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 ADAM30Q9UKF2 790 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 KANSL1LA0AUZ9 987 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 NBNO60934 754 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 FBXO21O94952 628 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 KRR1Q13601 381 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TTC33Q6PID6 262 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 VMP1Q96GC9 406 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 SEC16BQ96JE7 1060 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 CCT8L2Q96SF2 557 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TRIM8Q9BZR9 551 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 RPRD1BQ9NQG5 326 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TRPM5Q9NZQ8 1165 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 EIF3HO15372 352 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 TIMM44O43615 452 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 PLCL1Q15111 1095 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 FUT11Q495W5 492 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 ACSF2Q96CM8 615 aaPredicted RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 CNPY3Q9BT09 278 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 KCNH7Q9NS40 1196 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 RUVBL2Q9Y230 463 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 VDRP11473 427 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 JAK1P23458 1154 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 GTF2E2P29084 291 aaKnown RBP15.95■□□□□ 0.14
PTPN21-201ENST00000328736 RAB14P61106 215 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 PWP1Q13610 501 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 RAD9BQ6WBX8 426 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 PDLIM2Q96JY6 352 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 RAD54BQ9Y620 910 aa15.95■□□□□ 0.14
PTPN21-201ENST00000328736 STRNO43815 780 aa15.94■□□□□ 0.14
PTPN21-201ENST00000328736 CTCFP49711 727 aaPredicted RBP15.94■□□□□ 0.14
PTPN21-201ENST00000328736 ST13P50502 369 aaKnown RBP15.94■□□□□ 0.14
PTPN21-201ENST00000328736 PLD1Q13393 1074 aa15.94■□□□□ 0.14
PTPN21-201ENST00000328736 SHROOM1Q2M3G4 852 aaPredicted RBP15.94■□□□□ 0.14
PTPN21-201ENST00000328736 CCDC157Q569K6 752 aa15.94■□□□□ 0.14
PTPN21-201ENST00000328736 KLHDC7AQ5VTJ3 777 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms