RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 CHN2P52757 468 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 IRX4P78413 519 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 CUL2Q13617 745 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 HIC1Q14526 733 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 SFT2D3Q587I9 215 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 CFAP157Q5JU67 520 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 COL13A1Q5TAT6 717 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 TTC39BQ5VTQ0 682 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 ARMC3Q5W041 872 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 RNF111Q6ZNA4 994 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 SLC26A11Q86WA9 606 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 SAMD3Q8N6K7 520 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 MIPOL1Q8TD10 442 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 E2F7Q96AV8 911 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 LENG1Q96BZ8 264 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 PPP1R14BQ96C90 147 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 PDGFDQ9GZP0 370 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 PLK2Q9NYY3 685 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 HBS1LQ9Y450 684 aaKnown RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
GINS3-202ENST00000328514 ASTN2O75129 1339 aaPredicted RBP11.75□□□□□ -0.53
GINS3-202ENST00000328514 ZSCAN9O15535 394 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 ZNF862O60290 1169 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 USP1O94782 785 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 LSM8O95777 96 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 C4BPAP04003 597 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 MAGEA8P43361 318 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 CRKP46108 304 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 SCNN1DP51172 638 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 ZNF132P52740 706 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 GDF10P55107 478 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 PSMC5P62195 406 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 KDSRQ06136 332 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 DMP1Q13316 513 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 PSMD6Q15008 389 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 KBTBD12Q3ZCT8 623 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 CDHR3Q6ZTQ4 885 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 RFX8Q6ZV50 586 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 ARCQ7LC44 396 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TRIM74Q86UV6 250 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TRIM73Q86UV7 250 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 CRLF3Q8IUI8 442 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 ARID3BQ8IVW6 561 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 MARVELD2Q8N4S9 558 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 ACTL9Q8TC94 416 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 PRICKLE1Q96MT3 831 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 PREBQ9HCU5 417 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 HSFX1Q9UBD0 423 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 SH3BP1Q9Y3L3 701 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 A6NJR5 290 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 F8VP50 259 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 DENRO43583 198 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 OPHN1O60890 802 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 KRT37O76014 449 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 HLA-DRAP01903 254 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 SNRPAP09012 282 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 SMIM18P0DKX4 95 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 RPL5P46777 297 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 HSD17B4P51659 736 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 AQP5P55064 265 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 UBXN2AP68543 259 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 PDE1BQ01064 536 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 OTUD4Q01804 1114 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 CREB5Q02930 508 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 PDK3Q15120 406 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 BBS9Q3SYG4 887 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 KCNN1Q92952 543 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 FRMD8Q9BZ67 464 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 SUDS3Q9H7L9 328 aaPredicted RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 AGO4Q9HCK5 861 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 GINM1Q9NU53 330 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 DNAAF2Q9NVR5 837 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 XPO7Q9UIA9 1087 aaKnown RBP11.74□□□□□ -0.53
GINS3-202ENST00000328514 ITGA11Q9UKX5 1188 aa11.74□□□□□ -0.53
GINS3-202ENST00000328514 MYH9P35579 1960 aaKnown RBP11.73□□□□□ -0.53
GINS3-202ENST00000328514 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
GINS3-202ENST00000328514 TCRBV7S3A2A0A539 114 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 PRR5-ARHGAP8B1AHC4 643 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 TRDMT1O14717 391 aaKnown RBP11.73□□□□□ -0.53
GINS3-202ENST00000328514 EXTL3O43909 919 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 PIAS1O75925 651 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 KLHL2O95198 593 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 ABCD1P33897 745 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 ELK3P41970 407 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 INHBCP55103 352 aa11.73□□□□□ -0.53
GINS3-202ENST00000328514 MRPS5P82675 430 aaKnown RBP11.73□□□□□ -0.53
GINS3-202ENST00000328514 ARHGAP8P85298 464 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms