RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ZNF571Q7Z3V5 609 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 RIC8BQ9NVN3 520 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MYO1CO00159 1063 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 DNAJC8O75937 253 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 GFAPP14136 432 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 EIF1ADQ8N9N8 165 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 C12orf42Q96LP6 360 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 LRRC40Q9H9A6 602 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SARS2Q9NP81 518 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 DDX43Q9NXZ2 648 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CDY1Q9Y6F8 540 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 EML1O00423 815 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 IRF6O14896 467 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 PPFIA2O75334 1257 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 KLHL2O95198 593 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CCR1P32246 355 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CNTN2Q02246 1040 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 TBX2Q13207 712 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 STX3Q13277 289 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 ITGA9Q13797 1035 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 BEND6Q5SZJ8 279 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SPATA21Q7Z572 469 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 HAS1Q92839 578 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 NRBF2Q96F24 287 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 ELMO2Q96JJ3 720 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 SDR42E2A6NKP2 422 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF185O15231 689 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 MTO1Q9Y2Z2 717 aaKnown RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 FKTNO75072 461 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ICAM3P32942 547 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 PSEN1P49768 467 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 CMTM5Q96DZ9 223 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 PRKD2Q9BZL6 878 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ENTPD7Q9NQZ7 604 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 CNTNAP2Q9UHC6 1331 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 CSPG5O95196 566 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 CRTAMO95727 393 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 HMBSP08397 361 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 HMOX2P30519 316 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SP3Q02447 781 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 MDH1BQ5I0G3 518 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 GLRA4Q5JXX5 417 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 PPTC7Q8NI37 304 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 PCDH9Q9HC56 1237 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SLC24A2Q9UI40 661 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SHOC2Q9UQ13 582 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 STX7O15400 261 aaKnown RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 XYLBO75191 536 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 GRAP2O75791 330 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 RARGP13631 454 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 TKTL1P51854 596 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 HIBCHQ6NVY1 386 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF662Q6ZS27 426 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF606Q8WXB4 792 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 GPR63Q9BZJ6 419 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 EPN3Q9H201 632 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 PABPC3Q9H361 631 aaKnown RBP11.84□□□□□ -0.51
COL4A5-201ENST00000328300 SOAT2O75908 522 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 DCDC2Q9UHG0 476 aa11.84□□□□□ -0.51
COL4A5-201ENST00000328300 GLRA3O75311 464 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 AKT1P31749 480 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 ADCYAP1R1P41586 468 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 SPDL1Q96EA4 605 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 HSFY1Q96LI6 401 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 ARHGAP20Q9P2F6 1191 aa11.83□□□□□ -0.51
COL4A5-201ENST00000328300 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 RNASEH1O60930 286 aaKnown RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 FAM83EQ2M2I3 478 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 ICE2Q659A1 982 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 RETSATQ6NUM9 610 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 FAM47EQ6ZV65 393 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 LRRC49Q8IUZ0 686 aa11.83□□□□□ -0.52
COL4A5-201ENST00000328300 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
COL4A5-201ENST00000328300 CYP2W1Q8TAV3 490 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms