RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 KCTD6Q8NC69 237 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 TCP10LQ8TDR4 215 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 MPHOSPH6Q99547 160 aaKnown RBP20.77■□□□□ 0.92
SOX2-201ENST00000325404 PNPLA8Q9NP80 782 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 UNCXA6NJT0 531 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 TMEM63AO94886 807 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 TRUB2O95900 331 aaKnown RBP20.77■□□□□ 0.92
SOX2-201ENST00000325404 GNAZP19086 355 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 ADRA1DP25100 572 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 RAD23BP54727 409 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 DYNLT1P63172 113 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 SLC18A2Q05940 514 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 FAM13CQ8NE31 585 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 FZD8Q9H461 694 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 FAM124BQ9H5Z6 455 aaPredicted RBP20.77■□□□□ 0.92
SOX2-201ENST00000325404 MANSC1Q9H8J5 431 aa20.77■□□□□ 0.92
SOX2-201ENST00000325404 SAE1Q9UBE0 346 aaPredicted RBP20.77■□□□□ 0.92
SOX2-201ENST00000325404 HGSO14964 777 aaPredicted RBP20.76■□□□□ 0.91
SOX2-201ENST00000325404 DNAJC6O75061 913 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 RNF8O76064 485 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 CD19P15391 556 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 TCF7P36402 384 aaPredicted RBP20.76■□□□□ 0.91
SOX2-201ENST00000325404 GAD2Q05329 585 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 Q3C1V9 767 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ANKRD20A2Q5SQ80 823 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ANKRD20A1Q5TYW2 823 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ANKRD20A3Q5VUR7 823 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 RFX6Q8HWS3 928 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ZNF570Q96NI8 536 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ASNSD1Q9NWL6 643 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 SOCS7O14512 581 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 LGR5O75473 907 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 LMNAP02545 664 aaKnown RBP20.76■□□□□ 0.91
SOX2-201ENST00000325404 MT-ND3P03897 115 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 KCTD2Q14681 263 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 EFTUD2Q15029 972 aaKnown RBP eCLIP20.76■□□□□ 0.91
SOX2-201ENST00000325404 CTC1Q2NKJ3 1217 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 SMTNL2Q2TAL5 461 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 ZNF667Q5HYK9 610 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 CLNKQ7Z7G1 428 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 RNF149Q8NC42 400 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 STK32AQ8WU08 396 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 SLC44A1Q8WWI5 657 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 CPXM1Q96SM3 734 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 R3HDMLQ9H3Y0 253 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 CYP3A43Q9HB55 503 aa20.76■□□□□ 0.91
SOX2-201ENST00000325404 PEX11AO75192 247 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 LUC7L3O95232 432 aaKnown RBP20.75■□□□□ 0.91
SOX2-201ENST00000325404 MIPP30301 263 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 NEK3P51956 506 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 TFDP2Q14188 446 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 BBS9Q3SYG4 887 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 TAF1BQ53T94 588 aaPredicted RBP20.75■□□□□ 0.91
SOX2-201ENST00000325404 FAM47CQ5HY64 1035 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 KCNT1Q5JUK3 1230 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 SCARA5Q6ZMJ2 495 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 PLPPR4Q7Z2D5 763 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 LONP2Q86WA8 852 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 APBB2Q92870 758 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 MRRFQ96E11 262 aaKnown RBP20.75■□□□□ 0.91
SOX2-201ENST00000325404 MMP19Q99542 508 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 TRIM55Q9BYV6 548 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 VRTNQ9H8Y1 702 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 METTL5Q9NRN9 209 aaKnown RBP20.75■□□□□ 0.91
SOX2-201ENST00000325404 LRRC42Q9Y546 428 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 CHADO15335 359 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 RBP3P10745 1247 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 NOMO1Q15155 1222 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 ATF7IP2Q5U623 682 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 SH2D5Q6ZV89 423 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 APOPT1Q96IL0 206 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 MROH8Q9H579 483 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 NPHS2Q9NP85 383 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 USP18Q9UMW8 372 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 MTO1Q9Y2Z2 717 aaKnown RBP20.75■□□□□ 0.91
SOX2-201ENST00000325404 TEX264Q9Y6I9 313 aa20.75■□□□□ 0.91
SOX2-201ENST00000325404 TCRBV7S3A2A0A539 114 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 KLF11O14901 512 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 ERBB2P04626 1255 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 PGK2P07205 417 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 SRGAP2CP0DJJ0 459 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 ATICP31939 592 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 ETV4P43268 484 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 KCNJ11Q14654 390 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 FAM71DQ8N9W8 422 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 SYNCQ9H7C4 482 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 POLIQ9UNA4 740 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 HMGCRP04035 888 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 ZNF143P52747 638 aaPredicted RBP20.74■□□□□ 0.91
SOX2-201ENST00000325404 ZNF200P98182 395 aaPredicted RBP20.74■□□□□ 0.91
SOX2-201ENST00000325404 ROR1Q01973 937 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 PTPN11Q06124 597 aaPredicted RBP20.74■□□□□ 0.91
SOX2-201ENST00000325404 NAA25Q14CX7 972 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 PLEKHG4Q58EX7 1191 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 FAM91A1Q658Y4 838 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 BZW1Q7L1Q6 419 aaKnown RBP20.74■□□□□ 0.91
SOX2-201ENST00000325404 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
SOX2-201ENST00000325404 MIS12Q9H081 205 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 KANSL3Q9P2N6 904 aa20.74■□□□□ 0.91
SOX2-201ENST00000325404 TNFSF13BQ9Y275 285 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms