RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TSGA10Q9BZW7 698 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 ENTPD7Q9NQZ7 604 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 BUB1BO60566 1050 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 CALB1P05937 261 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 RFC1P35251 1148 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 GABRB2P47870 512 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 PGFP49763 221 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 MTMR3Q13615 1198 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 FAM102AQ5T9C2 384 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 TRNP1Q6NT89 227 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 MICAL1Q8TDZ2 1067 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 IPO4Q8TEX9 1081 aaKnown RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 ZNF592Q92610 1267 aa16.09■□□□□ 0.17
PRPF3-201ENST00000324862 TGS1Q96RS0 853 aaKnown RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 DMAP1Q9NPF5 467 aaPredicted RBP16.09■□□□□ 0.17
PRPF3-201ENST00000324862 FTCDO95954 541 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 USP17L7P0C7H9 530 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 SLC8A3P57103 927 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 USP46P62068 366 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 LIN9Q5TKA1 542 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 PPP2R2DQ66LE6 453 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 DNAJC24Q6P3W2 148 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 HFE2Q6ZVN8 426 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.175e-14■■■□□ 18.2
PRPF3-201ENST00000324862 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 ULBP1Q9BZM6 244 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 DNAI1Q9UI46 699 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 ANAPC7Q9UJX3 599 aa16.08■□□□□ 0.17
PRPF3-201ENST00000324862 PRUNE2Q8WUY3 3088 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 MYH10P35580 1976 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 C5orf67F2Z3F1 127 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 NCK2O43639 380 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 KIF5CO60282 957 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 TNNT1P13805 278 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 RPL34P49207 117 aaKnown RBP16.08■□□□□ 0.16
PRPF3-201ENST00000324862 DNA2P51530 1060 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 MESDQ14696 234 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 PPP1R15BQ5SWA1 713 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 C3orf20Q8ND61 904 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 GIPC2Q8TF65 315 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 MCRS1Q96EZ8 462 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 LRRC4Q9HBW1 653 aa16.08■□□□□ 0.16
PRPF3-201ENST00000324862 GOLGA6L9A6NEM1 432 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 ATF6P18850 670 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 FLT3P36888 993 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 RGS19P49795 217 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 SLC5A3P53794 718 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 ERVK-21P61565 698 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 ZNF252P-AS1Q0IIN9 211 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 ZNF461Q8TAF7 563 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 CYP4F11Q9HBI6 524 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
PRPF3-201ENST00000324862 TLR9Q9NR96 1032 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 C2orf71A6NGG8 1288 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 BTNL10A8MVZ5 291 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 TNFRSF10BO14763 440 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 PER2O15055 1255 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 ABLIM3O94929 683 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 MYBL1P10243 752 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 KRT3P12035 628 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 LRRC57Q8N9N7 239 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 FEZF2Q8TBJ5 459 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 FUBP3Q96I24 572 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRPF3-201ENST00000324862 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 PLVAPQ9BX97 442 aa16.07■□□□□ 0.16
PRPF3-201ENST00000324862 A0A0A6YYK5 440 aaPredicted RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 YJEFN3A6XGL0 299 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 E7ENQ6 273 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 TGM5O43548 720 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 ATF2P15336 505 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 ETF1P62495 437 aaKnown RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 GPM6BQ13491 265 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 RAB41Q5JT25 222 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 DCUN1D2Q6PH85 259 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 DAAM2Q86T65 1068 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 RHOT2Q8IXI1 618 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 SIX6OS1Q8N1H7 587 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 KCTD13Q8WZ19 329 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 TRIM11Q96F44 468 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 PSMB7Q99436 277 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 STRIP2Q9ULQ0 834 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 TMEM191CA6NGB0 347 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 TCF4P15884 667 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 BMP8BP34820 402 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms