RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 VTA1Q9NP79 307 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 UBN1Q9NPG3 1134 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 CLDN5O00501 218 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 TTC4O95801 387 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
DDR1-223ENST00000324771 CHKAP35790 457 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 KDSRQ06136 332 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 WSCD1Q658N2 575 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 PPIL6Q8IXY8 311 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 ARMC2Q8NEN0 867 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 ERP27Q96DN0 273 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 ZNF512Q96ME7 567 aaPredicted RBP12.32□□□□□ -0.44
DDR1-223ENST00000324771 ATXN3LQ9H3M9 355 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 DHX33Q9H6R0 707 aaKnown RBP12.32□□□□□ -0.44
DDR1-223ENST00000324771 ZFP69BQ9UJL9 534 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 ATP8B3O60423 1300 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
DDR1-223ENST00000324771 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 IRF1P10914 325 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 FSCN1Q16658 493 aaKnown RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 DEFB106AQ8N104 65 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 BBS5Q8N3I7 341 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 SP110Q9HB58 689 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 NFASCO94856 1347 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 GOLGA8TH3BQL2 631 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 FZD9O00144 591 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 O00370 1275 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 RIPK2O43353 540 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 FAM107AO95990 144 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 TPH1P17752 444 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 PCSK1P29120 753 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 MLH1P40692 756 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 PSEN2P49810 448 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 SCNN1GP51170 649 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 CRADDP78560 199 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 TMEM63BQ5T3F8 832 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 RASSF3Q86WH2 238 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 WDCPQ9H6R7 721 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 PSMC3IPQ9P2W1 217 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 KAT6AQ92794 2004 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 NEMP1O14524 444 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 PPP1R12AO14974 1030 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 EDIL3O43854 480 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 JCHAINP01591 159 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 EFHC1Q5JVL4 640 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 SYDE1Q6ZW31 735 aaPredicted RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
DDR1-223ENST00000324771 RMDN1Q96DB5 314 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 ASB7Q9H672 318 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 PAK5Q9P286 719 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 MYH6P13533 1939 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
DDR1-223ENST00000324771 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 GYG2O15488 501 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 HMGCRP04035 888 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 VCPP55072 806 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 PTPN20Q4JDL3 420 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 FASTKD1Q53R41 847 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 ZC3H12AQ5D1E8 599 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 RAB3IPQ96QF0 476 aaPredicted RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 LCMT1Q9UIC8 334 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 ELK3P41970 407 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 PRAMEP78395 509 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDR1-223ENST00000324771 ASTE1Q2TB18 679 aaPredicted RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 RUBCNQ92622 972 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 MINDY3Q9H8M7 445 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 TRPC7Q9HCX4 862 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 RPS6KL1Q9Y6S9 549 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 COL18A1P39060 1754 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 ARHGEF37A1IGU5 675 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 SPTLC1O15269 473 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 APOEP02649 317 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 SMIM10L2AP0DMW4 78 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 SMIM10L2BP0DMW5 78 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 CHRNB2P17787 502 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 RBL1P28749 1068 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 KDM7AQ6ZMT4 941 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 DEFB128Q7Z7B8 93 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 WDR75Q8IWA0 830 aaKnown RBP12.3□□□□□ -0.44
DDR1-223ENST00000324771 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
DDR1-223ENST00000324771 CPXM1Q96SM3 734 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms