RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CRADDP78560 199 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 GTF2BQ00403 316 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 SLC34A1Q06495 639 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 MXD4Q14582 209 aaPredicted RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 HABP4Q5JVS0 413 aaKnown RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 EEF1DP3Q658K8 133 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 FAM83AQ86UY5 434 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 ZBTB46Q86UZ6 589 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 EFCAB3Q8N7B9 438 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 RXFP2Q8WXD0 754 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 SGF29Q96ES7 293 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 AP5M1Q9H0R1 490 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 ATXN2Q99700 1313 aaKnown RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 PIK3CDO00329 1044 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 APOL1O14791 398 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 AIM2O14862 343 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 PDE5AO76074 875 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 UBA1P22314 1058 aaKnown RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 RPA3P35244 121 aaPredicted RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 NAMPTP43490 491 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 KLHL38Q2WGJ6 581 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 TFDP3Q5H9I0 405 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 C6orf89Q6UWU4 347 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 WWP1Q9H0M0 922 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 TLK1Q9UKI8 766 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 C2orf71A6NGG8 1288 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 DDX3YO15523 660 aaKnown RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 KRT38O76015 456 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 INSRRP14616 1297 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 ATP6V1C1P21283 382 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 RASA2Q15283 850 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 MTFR1Q15390 333 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 GRAMD4Q6IC98 578 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 HACE1Q8IYU2 909 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 TRPM4Q8TD43 1214 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 PYDC1Q8WXC3 89 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 OSMRQ99650 979 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 TRPV6Q9H1D0 765 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 ZMYND8Q9ULU4 1186 aaPredicted RBP15.86■□□□□ 0.13
VARS2-201ENST00000321897 UBIAD1Q9Y5Z9 338 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 HSPA4LO95757 839 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 TPP2P29144 1249 aaPredicted RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 ADSSP30520 456 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 DSG3P32926 999 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 PPP1R15BQ5SWA1 713 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 C16orf87Q6PH81 154 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 C12orf29Q8N999 325 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 TMC2Q8TDI7 906 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 TIPINQ9BVW5 301 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 NT5C1AQ9BXI3 368 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 ADA2Q9NZK5 511 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 USP12O75317 370 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 USP1O94782 785 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 APOEP02649 317 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 ZNF200P98182 395 aaPredicted RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 FASTKD3Q14CZ7 662 aaKnown RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 CHI3L2Q15782 390 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 EZH1Q92800 747 aaPredicted RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 CENPTQ96BT3 561 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 SMARCAD1Q9H4L7 1026 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 SENP1Q9P0U3 644 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 THEGQ9P2T0 379 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 NKX1-2Q9UD57 310 aaPredicted RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 PAIP2BQ9ULR5 123 aaKnown RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 IRF6O14896 467 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 MAFGO15525 162 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 GPC4O75487 556 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 ENO3P13929 434 aaPredicted RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 RPS6KA2Q15349 733 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 IER5Q5VY09 327 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 IRGCQ6NXR0 463 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 ZCCHC23Q6ZST2 131 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 FAM228AQ86W67 206 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 PLEKHO2Q8TD55 490 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 CGRRF1Q99675 332 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 SETD4Q9NVD3 440 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 DDX56Q9NY93 547 aaKnown RBP15.85■□□□□ 0.13
VARS2-201ENST00000321897 ABCC6O95255 1503 aa15.85■□□□□ 0.13
VARS2-201ENST00000321897 GOLGA8TH3BQL2 631 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 AVILO75366 819 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 BEST2Q8NFU1 509 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 OR6J1Q8NGC5 347 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 TCP10LQ8TDR4 215 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 PAFAH2Q99487 392 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 BCAP29Q9UHQ4 241 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 MARSP56192 900 aaKnown RBP15.84■□□□□ 0.13
VARS2-201ENST00000321897 MAMLD1Q13495 774 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 DCAF12L1Q5VU92 463 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 DENND5BQ6ZUT9 1274 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 RNF148Q8N7C7 305 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 DENND2DQ9H6A0 471 aaPredicted RBP15.84■□□□□ 0.13
VARS2-201ENST00000321897 MYH6P13533 1939 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 SRRM3A6NNA2 597 aaPredicted RBP15.84■□□□□ 0.13
VARS2-201ENST00000321897 FCHO1O14526 889 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms