RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 STAT5BP51692 787 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ZNF200P98182 395 aaPredicted RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 TFAMQ00059 246 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 CDK16Q00536 496 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 OVGP1Q12889 678 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 MXD4Q14582 209 aaPredicted RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 KRT72Q14CN4 511 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 TAF5Q15542 800 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 MPZL3Q6UWV2 235 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 TSHZ1Q6ZSZ6 1077 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 CYP4V2Q6ZWL3 525 aaPredicted RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 LRRC6Q86X45 466 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 RFX6Q8HWS3 928 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 TEX9Q8N6V9 391 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 SLC4A11Q8NBS3 891 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 TTC8Q8TAM2 541 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 SPATA18Q8TC71 538 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 WRNIP1Q96S55 665 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 KLF6Q99612 283 aaPredicted RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 BTBD10Q9BSF8 475 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 DCLRE1BQ9H816 532 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ARL8BQ9NVJ2 186 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 HOXC10Q9NYD6 342 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 HEY2Q9UBP5 337 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 MTO1Q9Y2Z2 717 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 A0A0G2JND7 137 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 KBTBD13C9JR72 458 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CHADO15335 359 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CD19P15391 556 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 RAP1GAPP47736 663 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 PTDSS1P48651 473 aaKnown RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 BASP1P80723 227 aaKnown RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 ROR1Q01973 937 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 KBTBD12Q3ZCT8 623 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 WDR78Q5VTH9 848 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 RFWD3Q6PCD5 774 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 POTEHQ6S545 545 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ZBTB8OSQ8IWT0 167 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 TAB3Q8N5C8 712 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 RNF149Q8NC42 400 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 KCTD6Q8NC69 237 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 RTP4Q96DX8 246 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ANKRD36BP1Q96IX9 119 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 NSL1Q96IY1 281 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 FAM167AQ96KS9 214 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 PEBP4Q96S96 227 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 TMEM120AQ9BXJ8 343 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 FRMD8Q9BZ67 464 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 SDCBP2Q9H190 292 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 C2orf40Q9H1Z8 148 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 PCSK1NQ9UHG2 260 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SIX4Q9UIU6 781 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 TTLL3Q9Y4R7 772 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 AFG3L2Q9Y4W6 797 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ZBTB42B2RXF5 422 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ACKR2O00590 384 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 GSC2O15499 205 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 RNF8O76064 485 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 IL18RAPO95256 599 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 INHBAP08476 426 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ACADSP16219 412 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SERPINB3P29508 390 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CDC25CP30307 473 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 TCF7P36402 384 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 MAGEA6P43360 314 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SERPINB4P48594 390 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ZNF143P52747 638 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 ARFIP2P53365 341 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 HIRAP54198 1017 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 NRLP54845 237 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 PTPN11Q06124 597 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 MTM1Q13496 603 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ZNF667Q5HYK9 610 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 METTL7BQ6UX53 244 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SAMD7Q7Z3H4 446 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SLC26A11Q86WA9 606 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CXorf38Q8TB03 319 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 SEPT1Q8WYJ6 367 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 JDP2Q8WYK2 163 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 HSPH1Q92598 858 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 FAM111AQ96PZ2 611 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 CALN1Q9BXU9 219 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 ELOVL4Q9GZR5 314 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 MMADHCQ9H3L0 296 aaPredicted RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 FZD8Q9H461 694 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 USP29Q9HBJ7 922 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 NXF1Q9UBU9 619 aaKnown RBP9.08□□□□□ -0.96
CLK1-201ENST00000321356 ZNF180Q9UJW8 692 aa9.08□□□□□ -0.96
CLK1-201ENST00000321356 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLK1-201ENST00000321356 CFAP69A5D8W1 941 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 CILPO75339 1184 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 MICAL2O94851 1124 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 SRGAP2CP0DJJ0 459 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 TGFB3P10600 412 aa9.07□□□□□ -0.96
CLK1-201ENST00000321356 PYGBP11216 843 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms