RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PLPPR4Q7Z2D5 763 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 CTAGE3PQ8IX95 158 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 FGD4Q96M96 766 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 BCO2Q9BYV7 579 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 GPD2P43304 727 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 ROR1Q01973 937 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 KRT81Q14533 505 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 FAF2Q96CS3 445 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 MMP19Q99542 508 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 IFT122Q9HBG6 1241 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 ASNSD1Q9NWL6 643 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.2■□□□□ 0.5
COL9A1-201ENST00000320755 TNFSF13BQ9Y275 285 aa18.2■□□□□ 0.5
COL9A1-201ENST00000320755 DDNO94850 711 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MT-ND3P03897 115 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 TRNP1Q6NT89 227 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 ACSS3Q9H6R3 686 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 RAB6BQ9NRW1 208 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 WDR35Q9P2L0 1181 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 A0A0G2JND7 137 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 GAS2O43903 313 aaKnown RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 PRPSAP2O60256 369 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 FAM155BO75949 473 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 IL18RAPO95256 599 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MOGSQ13724 837 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 SLC10A6Q3KNW5 377 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 KBTBD12Q3ZCT8 623 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 ZC3H12AQ5D1E8 599 aaKnown RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 PPP6R3Q5H9R7 873 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 ASRGL1Q7L266 308 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 FAM49BQ9NUQ9 324 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MCM8Q9UJA3 840 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 KBTBD13C9JR72 458 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MGAMO43451 1857 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 HBP1O60381 514 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 LGR5O75473 907 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 CNMDO75829 334 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 FAM183BPQ6ZVS7 135 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 FNIP1Q8TF40 1166 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
COL9A1-201ENST00000320755 RSAD1Q9HA92 442 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 RBPJLQ9UBG7 517 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 TSPAN16Q9UKR8 245 aa18.19■□□□□ 0.5
COL9A1-201ENST00000320755 MAGEB2O15479 319 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 KCNN4O15554 427 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 GPD1P21695 349 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 GSCP56915 257 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ADGRD1Q6QNK2 874 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 MTDHQ86UE4 582 aaKnown RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 SULF1Q8IWU6 871 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 MAGEC3Q8TD91 643 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 NSMCE1Q8WV22 266 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 TXLNGQ9NUQ3 528 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 EFR3BQ9Y2G0 817 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ECM2O94769 699 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ZNF286BP0CG31 522 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 ARF4P18085 180 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 CYP3A5P20815 502 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 PHKA2P46019 1235 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 FAAP100Q0VG06 881 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 PTK7Q13308 1070 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 RIPK1Q13546 671 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 KLHL38Q2WGJ6 581 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 LRRC6Q86X45 466 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 SCUBE3Q8IX30 993 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 DCAKDQ8WVC6 231 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 NLRP7Q8WX94 980 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 MYCBPQ99417 103 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-201ENST00000320755 MIS12Q9H081 205 aa18.18■□□□□ 0.5
COL9A1-201ENST00000320755 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 TCRBV9S1A1TA0A576 114 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 F5H423 210 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 DIAPH2O60879 1101 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 TMEM132DQ14C87 1099 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 TAF1BQ53T94 588 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PLEKHG4Q58EX7 1191 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PTPRN2Q92932 1015 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 MCRS1Q96EZ8 462 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 FAM111AQ96PZ2 611 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 LPIN3Q9BQK8 851 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 CXCL16Q9H2A7 254 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 SIP14410 1827 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 LPXNO60711 386 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ZWINTO95229 277 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 INHBAP08476 426 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 ZNF143P52747 638 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 NLRP9Q7RTR0 991 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 EXOC8Q8IYI6 725 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 PPM1NQ8N819 430 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 RFWD2Q8NHY2 731 aa18.17■□□□□ 0.5
COL9A1-201ENST00000320755 UTP4Q969X6 686 aaKnown RBP18.17■□□□□ 0.5
COL9A1-201ENST00000320755 CYTH2Q99418 400 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms