RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 DEFB128Q7Z7B8 93 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SMYD4Q8IYR2 804 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF557Q8N988 423 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 GLIS3Q8NEA6 775 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PLEKHO2Q8TD55 490 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SMARCD1Q96GM5 515 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SENP8Q96LD8 212 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 NECTIN4Q96NY8 510 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 UIMC1Q96RL1 719 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TTLL2Q9BWV7 592 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TSGA10Q9BZW7 698 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TLR9Q9NR96 1032 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 OLA1Q9NTK5 396 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SCHIP1Q9P0W5 487 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 AGAP1Q9UPQ3 857 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 STXBP5LQ9Y2K9 1186 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 LUC7L2Q9Y383 392 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF487B1APH4 448 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 AKR1B15C9JRZ8 316 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 F8VZ95 297 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 H0YGN5 161 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 XPO1O14980 1071 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MTA2O94776 668 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CALB1P05937 261 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ACO1P21399 889 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 KPNA1P52294 538 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 EPHA5P54756 1037 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MLLT6P55198 1093 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 DEFB103AP81534 67 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 IFI16Q16666 785 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MAP7D1Q3KQU3 841 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SGO2Q562F6 1265 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SFMBT2Q5VUG0 894 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TCERG1LQ5VWI1 586 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 OVOS1Q6IE37 1185 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CD300LGQ6UXG3 332 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.49□□□□□ -1.857e-18■■■■■ 58.6
SCAMP1-201ENST00000320280 DDX42Q86XP3 938 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 OR8K1Q8NGG5 319 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MYCBPAPQ8TBZ2 947 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 HPS3Q969F9 1004 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 NXPE3Q969Y0 559 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TIFAQ96CG3 184 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TMEM176AQ96HP8 235 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ZMAT2Q96NC0 199 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SH2D3AQ9BRG2 576 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 FBXO44Q9H4M3 255 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PCIF1Q9H4Z3 704 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 NSUN3Q9H649 340 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 KIF9Q9HAQ2 790 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 DNAAF2Q9NVR5 837 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 FBXW11Q9UKB1 542 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 COG5Q9UP83 839 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 NUB1Q9Y5A7 615 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PAXBP1Q9Y5B6 917 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF638Q14966 1978 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CYB561D2O14569 222 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MFAP3LO75121 409 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 FGF18O76093 207 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 DLATP10515 647 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CYLC1P35663 651 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ADH7P40394 386 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CHMP4BP1P59074 171 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 FOXK2Q01167 660 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 BST2Q10589 180 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ASIC2Q16515 512 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 DUSP6Q16828 381 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 TCTN1Q2MV58 587 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CBWD6Q4V339 395 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CBWD3Q5JTY5 395 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CBWD5Q5RIA9 395 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 C1orf228Q6PIY5 440 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 CACNA2D4Q7Z3S7 1137 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PHF13Q86YI8 300 aaPredicted RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PSTKQ8IV42 348 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PDCL2Q8N4E4 241 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 EFHBQ8N7U6 833 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 VN1R2Q8NFZ6 395 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 FNIP1Q8TF40 1166 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 MYRFLQ96LU7 910 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 LSM14BQ9BX40 385 aaKnown RBP3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SFXN1Q9H9B4 322 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 NENFQ9UMX5 172 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 GINS2Q9Y248 185 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 PCDHB5Q9Y5E4 795 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 SCINQ9Y6U3 715 aa3.49□□□□□ -1.85
SCAMP1-201ENST00000320280 ANAPC1Q9H1A4 1944 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 KIAA1549LQ6ZVL6 1849 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 DDHD2O94830 711 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 CSH1P0DML2 217 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 CSH2P0DML3 217 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 NFKB1P19838 968 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 FGFR4P22455 802 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 MAN1A1P33908 653 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 CTNNB1P35222 781 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 GCLMP48507 274 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 STX17P56962 302 aa3.48□□□□□ -1.85
SCAMP1-201ENST00000320280 CDR2Q01850 454 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms