RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 MAP3K14Q99558 947 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 MRPL47Q9HD33 250 aaKnown RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 WBP1LQ9NX94 342 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 TIMM13Q9Y5L4 95 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 MEI4A8MW99 385 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 FTLP02792 175 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 EIF4BP23588 611 aaKnown RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 EFNA5P52803 228 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 KCNB1Q14721 858 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 P3H1Q32P28 736 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 MGAT5BQ3V5L5 792 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 PLEKHM3Q6ZWE6 761 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 EPS8L3Q8TE67 593 aaKnown RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 GAD1Q99259 594 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 AGPAT5Q9NUQ2 364 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 RBAKQ9NYW8 714 aaPredicted RBP7.56□□□□□ -1.2
CCDC93-201ENST00000319432 CEP72Q9P209 647 aa7.56□□□□□ -1.2
CCDC93-201ENST00000319432 MEIS2O14770 477 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SNX2O60749 519 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CCDC22O60826 627 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SGPL1O95470 568 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CTDNEP1O95476 244 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ALDH2P05091 517 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 KYNUQ16719 465 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 KLHL38Q2WGJ6 581 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZNF484Q5JVG2 852 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 NOTUMQ6P988 496 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 IZUMO2Q6UXV1 221 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CHRDL2Q6WN34 429 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 THEM5Q8N1Q8 247 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 BTN2A2Q8WVV5 523 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PBXIP1Q96AQ6 731 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SEPT5Q99719 369 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CCSER1Q9C0I3 900 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SLC13A4Q9UKG4 626 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 NWD2Q9ULI1 1742 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 C1orf232A0A0U1RR37 186 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SMIM10L2AP0DMW4 78 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SMIM10L2BP0DMW5 78 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SERPINB5P36952 375 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ARL4AP40617 200 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CLK1P49759 484 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 VEPH1Q14D04 833 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 AMHR2Q16671 573 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ATF7IP2Q5U623 682 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SPIRE2Q8WWL2 714 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 C9orf72Q96LT7 481 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 REXO4Q9GZR2 422 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PIF1Q9H611 641 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 AGO4Q9HCK5 861 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZNF112Q9UJU3 913 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 GRID2IPA4D2P6 1211 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 EYA4O95677 639 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 AMHP03971 560 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PYGMP11217 842 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ANXA13P27216 316 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 RAB14P61106 215 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 OASLQ15646 514 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 LRRC8BQ6P9F7 803 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 TSHZ1Q6ZSZ6 1077 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 REXO1L1PQ8IX06 675 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZBTB18Q99592 522 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 COL20A1Q9P218 1284 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 DSEQ9UL01 958 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SNX12Q9UMY4 172 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ARHGEF37A1IGU5 675 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 TAF4O00268 1085 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 FAM107AO95990 144 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ST13P50502 369 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 NME5P56597 212 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 GPC5P78333 572 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 MS4A4AQ96JQ5 239 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 C12orf42Q96LP6 360 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PRMT7Q9NVM4 692 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SEPT3Q9UH03 358 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 CHD4Q14839 1912 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 KPNA7A9QM74 516 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PFDN6O15212 129 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 TRIM49P0CI25 452 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 TRIM49CP0CI26 452 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ADARP55265 1226 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 TMEM63BQ5T3F8 832 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ZNF697Q5TEC3 545 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 MIER2Q8N344 545 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 SLC30A5Q8TAD4 765 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 MTBPQ96DY7 904 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 NGRNQ9NPE2 291 aaKnown RBP7.55□□□□□ -1.2
CCDC93-201ENST00000319432 PSD3Q9NYI0 1048 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 STMN3Q9NZ72 180 aa7.55□□□□□ -1.2
CCDC93-201ENST00000319432 ASAP2O43150 1006 aa7.54□□□□□ -1.2
CCDC93-201ENST00000319432 MFN2O95140 757 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms