RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 BFARQ9NZS9 450 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 MORF4L1Q9UBU8 362 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 NCANO14594 1321 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CLDN5O00501 218 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CNMDO75829 334 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 RPLP2P05387 115 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SERPINB6P35237 376 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 PPP2R2AP63151 447 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 COG7P83436 770 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 THOC5Q13769 683 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM171A1Q5VUB5 890 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 MSL3Q8N5Y2 521 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 PABPC5Q96DU9 382 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 DEFB118Q96PH6 123 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 CNOT10Q9H9A5 744 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SP110Q9HB58 689 aa9.7□□□□□ -0.86
TMEM39A-201ENST00000319172 SEPT4O43236 478 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ALDH2P05091 517 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 PTPN1P18031 435 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 FECHP22830 423 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 DNAJB2P25686 324 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 MAGEA4P43358 317 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 CTCFP49711 727 aaPredicted RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 EPHB1P54762 984 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 YWHAZP63104 245 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 PTPN20Q4JDL3 420 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TAS1R3Q7RTX0 852 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 BHMTQ93088 406 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TTC17Q96AE7 1141 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ATXN7L3BQ96GX2 97 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TRIM62Q9BVG3 475 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 CCDC68Q9H2F9 335 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 PGAP2Q9UHJ9 254 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 RAB21Q9UL25 225 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 COQ4Q9Y3A0 265 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 IQANK1A0A1B0GTG1 560 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 FKTNO75072 461 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SASH3O75995 380 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 KRT37O76014 449 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 LCA5LO95447 670 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 MYBL2P10244 700 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 XPAP23025 273 aaPredicted RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 BRCC3P46736 316 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TAS2R40P59535 323 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TAPT1Q6NXT6 567 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 B3GNT9Q6UX72 402 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SLFN11Q7Z7L1 901 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 PIGZQ86VD9 579 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 RAB3IL1Q8TBN0 382 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 TFAP2BQ92481 460 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ARL8AQ96BM9 186 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ELOVL4Q9GZR5 314 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 NOCTQ9UK39 431 aaKnown RBP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 PADI3Q9ULW8 664 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC45A1Q9Y2W3 748 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 GIPC1O14908 333 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 CHRNB2P17787 502 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC6A3Q01959 620 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 FAM183BPQ6ZVS7 135 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 JOSD2Q8TAC2 188 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 HES6Q96HZ4 224 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 FBXL18Q96ME1 805 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 ULBP1Q9BZM6 244 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 DNPEPQ9ULA0 475 aa9.69□□□□□ -0.86
TMEM39A-201ENST00000319172 HOXC6P09630 235 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 USP17L7P0C7H9 530 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 IRF1P10914 325 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 TRADDQ15628 312 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 TARBP2Q15633 366 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CCNG2Q16589 344 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 C9orf57Q5W0N0 161 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF467Q7Z7K2 595 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PHF13Q86YI8 300 aaPredicted RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CPXM1Q96SM3 734 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CEP41Q9BYV8 373 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 DCLK3Q9C098 648 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 TRMT13Q9NUP7 481 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CACNG4Q9UBN1 327 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 A0A1B0GUA9 196 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 BTNL10A8MVZ5 291 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CRCPO75575 148 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CABYRO75952 493 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 MMP8P22894 467 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 GRK4P32298 578 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 RPL21P46778 160 aaKnown RBP9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 C3orf62Q6ZUJ4 267 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 CPNE8Q86YQ8 564 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 B3GALNT2Q8NCR0 500 aa9.68□□□□□ -0.86
TMEM39A-201ENST00000319172 FBXO32Q969P5 355 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms