RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 MRPS5P82675 430 aaKnown RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 CUL2Q13617 745 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CCDC60Q8IWA6 550 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 KATNAL2Q8IYT4 538 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 GATA6Q92908 595 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 ZDHHC15Q96MV8 337 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 FAM210AQ96ND0 272 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 GORASP1Q9BQQ3 440 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 PREBQ9HCU5 417 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
RPGR-201ENST00000318842 APPL1Q9UKG1 709 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 MFHAS1Q9Y4C4 1052 aa10.05□□□□□ -0.8
RPGR-201ENST00000318842 CNTNAP2Q9UHC6 1331 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 FOXD2O60548 495 aaPredicted RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 NPTXRO95502 500 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 APRTP07741 180 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 PPM1JQ5JR12 505 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 EFHC2Q5JST6 749 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 FBXL19Q6PCT2 694 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GPD1LQ8N335 351 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 UBA3Q8TBC4 463 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GLT8D2Q9H1C3 349 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 TMEM165Q9HC07 324 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 LMCD1Q9NZU5 365 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 PLA2G4CQ9UP65 541 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SMG5Q9UPR3 1016 aaKnown RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 DOCK5Q9H7D0 1870 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SCN9AQ15858 1988 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GOLGA8QA0A0J9YX86 632 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GOLGA8OA6NCC3 632 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 ANKRD33BA6NCL7 494 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 CAPN8A6NHC0 703 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GOLGA8NF8WBI6 632 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 INHBAP08476 426 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 KRT19P08727 400 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 MAPTP10636 758 aaKnown RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 TCN1P20061 433 aaPredicted RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 ARRB2P32121 409 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SERPINB6P35237 376 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SLC1A1P43005 524 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 ATXN1P54253 815 aaKnown RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 PRKD1Q15139 912 aaPredicted RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 DACT2Q5SW24 774 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 IRGCQ6NXR0 463 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 C15orf52Q6ZUT6 534 aaKnown RBP10.04□□□□□ -0.8
RPGR-201ENST00000318842 SCUBE1Q8IWY4 988 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 TMEM192Q8IY95 271 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 FAM156AQ8NDB6 213 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 GMCL1P1Q8NEA9 526 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 EXD1Q8NHP7 514 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 MTBPQ96DY7 904 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 NDNQ99608 321 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 IKBKGQ9Y6K9 419 aa10.04□□□□□ -0.8
RPGR-201ENST00000318842 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PROCP04070 461 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 TMEM191BP0C7N4 346 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 RBP3P10745 1247 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 EIF3EP60228 445 aaKnown RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 TFAMQ00059 246 aaKnown RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 AP1B1Q10567 949 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 MSLNQ13421 630 aaPredicted RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 NFIL3Q16649 462 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 GRAMD1BQ3KR37 738 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 RASSF3Q86WH2 238 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 CPNE9Q8IYJ1 553 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PHTF2Q8N3S3 785 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PPFIBP2Q8ND30 876 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 SPATA18Q8TC71 538 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 MAIP1Q8WWC4 291 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 IQCGQ9H095 443 aaKnown RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 VCXQ9H320 206 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PLAC1Q9HBJ0 212 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PNPOQ9NVS9 261 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 SLC9A2Q9UBY0 812 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 YDJCA8MPS7 323 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 COPEO14579 308 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 LRCH4O75427 683 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 EGFRP00533 1210 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 NCF2P19878 526 aaPredicted RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 ETV4P43268 484 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 NUMBP49757 651 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 NCKAP1LP55160 1127 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 TFDP3Q5H9I0 405 aa10.03□□□□□ -0.8
RPGR-201ENST00000318842 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
RPGR-201ENST00000318842 DARS2Q6PI48 645 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms