RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 FAM3CQ92520 227 aa30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 ATOH1Q92858 354 aaPredicted RBP30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 FBXO32Q969P5 355 aa30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 LRRC3BQ96PB8 259 aa30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 GKN1Q9NS71 199 aa30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.9■■■□□ 2.54
SYNGR1-202ENST00000318801 TICRRQ7Z2Z1 1910 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 LRRN2O75325 713 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 MAP3K7CLP57077 242 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 SLC8A3P57103 927 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 AMPD2Q01433 879 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 TCF15Q12870 199 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 ZNF394Q53GI3 561 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 TTC16Q8NEE8 873 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 TATDN2Q93075 761 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 TMEM176AQ96HP8 235 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 CSNK1G1Q9HCP0 422 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 TMEM30AQ9NV96 361 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 DACH1Q9UI36 760 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 CCL26Q9Y258 94 aa30.89■■■□□ 2.54
SYNGR1-202ENST00000318801 NCANO14594 1321 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 ANAPC1Q9H1A4 1944 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 C2orf78A6NCI8 922 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 H0Y858 1186 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 ARNTLO00327 626 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 CUL2Q13617 745 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 TPD52L1Q16890 204 aaPredicted RBP30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 ITPRIPL2Q3MIP1 535 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 RALGPS2Q86X27 583 aaPredicted RBP30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 ZFYVE19Q96K21 471 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 TWNKQ96RR1 684 aa30.88■■■□□ 2.53
SYNGR1-202ENST00000318801 SLC5A3P53794 718 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 MARSP56192 900 aaKnown RBP30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 PDGFRLQ15198 375 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 CREBRFQ8IUR6 639 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 WHAMMQ8TF30 809 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 NT5C1BQ96P26 610 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 SMOQ99835 787 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 GCNT4Q9P109 453 aa30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 NDRG2Q9UN36 371 aaKnown RBP30.87■■■□□ 2.53
SYNGR1-202ENST00000318801 EXOC4Q96A65 974 aa30.86■■■□□ 2.53
SYNGR1-202ENST00000318801 GTSE1Q9NYZ3 720 aa30.86■■■□□ 2.53
SYNGR1-202ENST00000318801 ARHGAP26Q9UNA1 814 aa30.86■■■□□ 2.53
SYNGR1-202ENST00000318801 TNFRSF10BO14763 440 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 KCNH2Q12809 1159 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 LRMPQ12912 555 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 TRIM59Q8IWR1 403 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 SCAMP5Q8TAC9 235 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 SLC22A12Q96S37 553 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 FAM83CQ9BQN1 747 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 PNPLA8Q9NP80 782 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 LMBRD1Q9NUN5 540 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 IL37Q9NZH6 218 aa30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 CHORDC1Q9UHD1 332 aaPredicted RBP30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 MTF2Q9Y483 593 aaPredicted RBP30.85■■■□□ 2.53
SYNGR1-202ENST00000318801 AFPP02771 609 aaKnown RBP30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 TARSP26639 723 aaKnown RBP30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 RPS9P46781 194 aaKnown RBP30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 MTF1Q14872 753 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 ANGPT1Q15389 498 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 C1orf210Q8IVY1 113 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 SH3RF2Q8TEC5 729 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 ARID3AQ99856 593 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 DUSP16Q9BY84 665 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 DUS2Q9NX74 493 aaKnown RBP30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 DLGAP2Q9P1A6 1054 aa30.84■■■□□ 2.53
SYNGR1-202ENST00000318801 IFNAR2P48551 515 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 RAD23BP54727 409 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 RUNX3Q13761 415 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 HECTD3Q5T447 861 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 CLEC20AQ6ZU45 233 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 DDX42Q86XP3 938 aaKnown RBP eCLIP30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 CLDN23Q96B33 292 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 NACA2Q9H009 215 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 TLR8Q9NR97 1041 aaKnown RBP30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 SPATA6Q9NWH7 488 aaPredicted RBP30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 KIAA1257Q9ULG3 409 aa30.83■■■□□ 2.53
SYNGR1-202ENST00000318801 SPECC1L-ADORA2AF8WAN1 911 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 BEST1O76090 585 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 TCF3P15923 654 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 SLC7A9P82251 487 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 TNK2Q07912 1038 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 NR1H3Q13133 447 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 PPP1R26Q5T8A7 1209 aaPredicted RBP30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 PPM1KQ8N3J5 372 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 SLC4A11Q8NBS3 891 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 TTC8Q8TAM2 541 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 ATP2A3Q93084 1043 aa30.82■■■□□ 2.52
SYNGR1-202ENST00000318801 CTHP32929 405 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 TUBP50607 506 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 LRRC32Q14392 662 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 ZNF77Q15935 545 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 SNX30Q5VWJ9 437 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 CPA6Q8N4T0 437 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 KIAA1958Q8N8K9 716 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 ZMIZ2Q8NF64 920 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 OSCP1Q8WVF1 389 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 JAKMIP2Q96AA8 810 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 EBF3Q9H4W6 596 aa30.81■■■□□ 2.52
SYNGR1-202ENST00000318801 FAM92AA1XBS5 289 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms