RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ITPRIPL1Q6GPH6 555 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 KCNV2Q8TDN2 545 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 FAM111AQ96PZ2 611 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 GPR20Q99678 358 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 CCDC68Q9H2F9 335 aa13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHB9-201ENST00000316105 SIGLEC16A6NMB1 481 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 M0QYT0 321 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 FBXO47Q5MNV8 452 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 MCUQ8NE86 351 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 NIFKQ9BYG3 293 aaKnown RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 MID2Q9UJV3 735 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 APOBEC2Q9Y235 224 aaKnown RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 GPC4O75487 556 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 HMGCRP04035 888 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 KDELR1P24390 212 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 HADHBP55084 474 aaKnown RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 DLK2Q6UY11 383 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 NDUFAF2Q8N183 169 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 C12orf42Q96LP6 360 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 APOBEC3GQ9HC16 384 aaKnown RBP13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 CPA4Q9UI42 421 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 AP4E1Q9UPM8 1137 aa13.96□□□□□ -0.17
PCDHB9-201ENST00000316105 IGF2BP3O00425 579 aaKnown RBP eCLIP13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 FAM200BP0CF97 657 aa13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 C15orf59Q2T9L4 293 aaPredicted RBP13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 LRRC38Q5VT99 294 aa13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC24A2Q9UI40 661 aa13.96□□□□□ -0.18
PCDHB9-201ENST00000316105 DCDC2CA8MYV0 355 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SPECC1L-ADORA2AF8WAN1 911 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DFFAO00273 331 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 STRNO43815 780 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ICAM3P32942 547 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 PDK1Q15118 436 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 BTBD8Q5XKL5 378 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MON1BQ7L1V2 547 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DCLK2Q8N568 766 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 VCXQ9H320 206 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MANSC1Q9H8J5 431 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SUFUQ9UMX1 484 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 FNDC3AQ9Y2H6 1198 aaKnown RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 UBOX5O94941 541 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 NCAM1P13591 858 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ELK3P41970 407 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 CPT1AP50416 773 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 BIRC2Q13490 618 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 PKN2Q16513 984 aaKnown RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC27A1Q6PCB7 646 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 TFB1MQ8WVM0 346 aaKnown RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DNAJB3Q8WWF6 145 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 LRFN2Q9ULH4 789 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MROH7Q68CQ1 1323 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 TMEM191CA6NGB0 347 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 RPS6KA2Q15349 733 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 TTC39BQ5VTQ0 682 aaPredicted RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 PLEKHA7Q6IQ23 1121 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ADGRF2Q8IZF7 708 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC38A7Q9NVC3 462 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 HES2Q9Y543 173 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 XIRP1Q702N8 1843 aaKnown RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MYH11P35749 1972 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 DIAPH2O60879 1101 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 CACNB2Q08289 660 aaPredicted RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 FIZ1Q96SL8 496 aa13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 CPSF3Q9UKF6 684 aaKnown RBP13.95□□□□□ -0.18
PCDHB9-201ENST00000316105 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 BCORQ6W2J9 1755 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 C17orf102A2RUQ5 167 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 APOC4-APOC2K7ER74 178 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 KIF1CO43896 1103 aaKnown RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 APOC2P02655 101 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 SP2Q02086 613 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 SLC39A4Q6P5W5 647 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 BBS5Q8N3I7 341 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 STAMBPL1Q96FJ0 436 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 TEPSINQ96N21 525 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 UBXN6Q9BZV1 441 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 XAB2Q9HCS7 855 aaKnown RBP13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 E2F8A0AVK6 867 aa13.94□□□□□ -0.18
PCDHB9-201ENST00000316105 MTA2O94776 668 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms