RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 EPHB4P54760 987 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 TMF1P82094 1093 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 MYO1EQ12965 1108 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.66□□□□□ -1.66
SMCO3-201ENST00000316048 MANEALQ5VSG8 457 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 AGAP9Q5VTM2 703 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 TCERG1LQ5VWI1 586 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 LGI4Q8N135 537 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMCO3-201ENST00000316048 OR56A1Q8NGH5 318 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 DNAJB14Q8TBM8 379 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 OTUD7AQ8TE49 926 aaPredicted RBP4.66□□□□□ -1.66
SMCO3-201ENST00000316048 TMEM171Q8WVE6 324 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 USP40Q9NVE5 1235 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 ZNF69Q9UC07 566 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 CAPN11Q9UMQ6 739 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 MTO1Q9Y2Z2 717 aaKnown RBP4.66□□□□□ -1.66
SMCO3-201ENST00000316048 TRPM1Q7Z4N2 1603 aa4.66□□□□□ -1.66
SMCO3-201ENST00000316048 RNF17Q9BXT8 1623 aaKnown RBP4.66□□□□□ -1.66
SMCO3-201ENST00000316048 RPGRIP1LQ68CZ1 1315 aa4.65□□□□□ -1.66
SMCO3-201ENST00000316048 NEURL4Q96JN8 1562 aa4.65□□□□□ -1.66
SMCO3-201ENST00000316048 CEP152O94986 1710 aa4.65□□□□□ -1.66
SMCO3-201ENST00000316048 MROH1Q8NDA8 1641 aa4.65□□□□□ -1.66
SMCO3-201ENST00000316048 EFCAB6Q5THR3 1501 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 PRRT4C9JH25 899 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 AGPSO00116 658 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 IRAK2O43187 625 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 CCP110O43303 1012 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 INHBBP09529 407 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 NPPBP16860 134 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 PXNP49023 591 aaPredicted RBP4.65□□□□□ -1.67
SMCO3-201ENST00000316048 SEC24CP53992 1094 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 CUL4BQ13620 913 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 TAF12Q16514 161 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 SLC5A9Q2M3M2 681 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 BTBD16Q32M84 506 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 FAXCQ5TGI0 409 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 MCTP1Q6DN14 999 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 HEATR4Q86WZ0 1026 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 CPOQ8IVL8 374 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 CSGALNACT1Q8TDX6 532 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 RUBCNQ92622 972 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 SLC25A32Q9H2D1 315 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 PDP2Q9P2J9 529 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 RGS17Q9UGC6 210 aaPredicted RBP4.65□□□□□ -1.67
SMCO3-201ENST00000316048 PGAP2Q9UHJ9 254 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 RAD54BQ9Y620 910 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 LAMC1P11047 1609 aa4.65□□□□□ -1.67
SMCO3-201ENST00000316048 LAMTOR5O43504 91 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 IPO13O94829 963 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ELANEP08246 267 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ITGA2BP08514 1039 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SPATA31D3P0C874 917 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 KCNA3P22001 575 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 FGFR4P22455 802 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 RPS19P39019 145 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 RNASE9P60153 205 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 OCA2Q04671 838 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 MGAT5BQ3V5L5 792 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 VPS53Q5VIR6 699 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 Q6ZRM9 215 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SPATA31D4Q6ZUB0 917 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 GATAD2AQ86YP4 633 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 TMTC1Q8IUR5 882 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 POC1BQ8TC44 478 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 TBATAQ96M53 351 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 MED15Q96RN5 788 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 DHX36Q9H2U1 1008 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PABPC3Q9H361 631 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 GBA2Q9HCG7 927 aaPredicted RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 TMEM8AQ9HCN3 771 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 FSCN3Q9NQT6 498 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PPP4R1LQ9P1A2 415 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 GJD2Q9UKL4 321 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 DTNAQ9Y4J8 743 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 BCORL1Q5H9F3 1711 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 CLTCL1P53675 1640 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 KTN1Q86UP2 1357 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 DIP2BQ9P265 1576 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 A0A1B0GTW7 788 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 CCDC195A0A1B0GUA6 201 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 A0A1B0GVC2 190 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 TOR1BO14657 336 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 MFAP3LO75121 409 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ACTL6BO94805 426 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ERBB2P04626 1255 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 CSF1RP07333 972 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 FAM163BP0C2L3 166 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ATXN1LP0C7T5 689 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 MGAT1P26572 445 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ADORA2AP29274 412 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 CNR2P34972 360 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 RAP1GAPP47736 663 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 DGKEP52429 567 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms