RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PPP1R12CQ9BZL4 782 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 FAM204AQ9H8W3 233 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 AAASQ9NRG9 546 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 USP18Q9UMW8 372 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 UTP11Q9Y3A2 253 aaKnown RBP7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 MED7O43513 233 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 CST8O60676 142 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 IVDP26440 423 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 HDAC4P56524 1084 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 PLCB3Q01970 1234 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 SF3A3Q12874 501 aaKnown RBP eCLIP7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 SMAD1Q15797 465 aaKnown RBP7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 UPP1Q16831 310 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 C1orf228Q6PIY5 440 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 TMC3Q7Z5M5 1100 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 ZMIZ2Q8NF64 920 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 SCAMP5Q8TAC9 235 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 PGLYRP2Q96PD5 576 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 ASIC3Q9UHC3 531 aa7.35□□□□□ -1.23
LYSMD3-201ENST00000315948 hCG_1818297A0A087WSY0 165 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 GOLGA6L10A0A0M3HER8 536 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 BHMG1C9JSJ3 638 aaPredicted RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CCDC188H7C350 402 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CLEC20AQ6ZU45 233 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 MAATS1Q7Z4T9 603 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 KATNAL2Q8IYT4 538 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 LRRC52Q8N7C0 313 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 TRIM11Q96F44 468 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CEP41Q9BYV8 373 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 RSAD1Q9HA92 442 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 ETNK2Q9NVF9 386 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 PTPN1P18031 435 aaKnown RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 IL4RP24394 825 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 GPR15P49685 360 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 GLE1Q53GS7 698 aaKnown RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 DEFB128Q7Z7B8 93 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 DBF4BQ8NFT6 615 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CCDC26Q8TAB7 109 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 ACTL9Q8TC94 416 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 MED10Q9BTT4 135 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 SLITRK6Q9H5Y7 841 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 ADAM21Q9UKJ8 722 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 NAALADL1Q9UQQ1 740 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CASP8AP2Q9UKL3 1982 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 A0A0U1RQF3 1178 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 TCRBV7S3A2A0A539 114 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 YJEFN3A6XGL0 299 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 E7ENQ6 273 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 ACSL3O95573 720 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 USP17L7P0C7H9 530 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 BDNFP23560 247 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 AXLP30530 894 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CDH6P55285 790 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 OTUD4Q01804 1114 aaKnown RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 CEP85LQ5SZL2 805 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 FAXCQ5TGI0 409 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 DSTYKQ6XUX3 929 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 RSPH3Q86UC2 560 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 IQCKQ8N0W5 287 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 KCTD6Q8NC69 237 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 TBCBQ99426 244 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 SMOQ99835 787 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 TRIM56Q9BRZ2 755 aaKnown RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 HMX1Q9NP08 348 aaPredicted RBP7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 HEY1Q9Y5J3 304 aa7.34□□□□□ -1.23
LYSMD3-201ENST00000315948 PSTPIP1O43586 416 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 UPP2O95045 317 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 ECEL1O95672 775 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 TRUB2O95900 331 aaKnown RBP7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC1A1P43005 524 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 GABRB2P47870 512 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 ADCY1Q08828 1119 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 NME3Q13232 169 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 DSC3Q14574 896 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 DCAF6Q58WW2 860 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 OTUD1Q5VV17 481 aaPredicted RBP7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 GSTA5Q7RTV2 222 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 UNC45BQ8IWX7 931 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 MRRFQ96E11 262 aaKnown RBP7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 FMO2Q99518 471 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 GDAP2Q9NXN4 497 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 BCCIPQ9P287 314 aaKnown RBP eCLIP7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 CTNNAL1Q9UBT7 734 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 HESX1Q9UBX0 185 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 PCYOX1Q9UHG3 505 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 SPEGQ15772 3267 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 H0YGN5 161 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 GPR182O15218 404 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 CD4P01730 458 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 KDELR1P24390 212 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 CHRNA3P32297 505 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 ITGA8P53708 1063 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 TERF2Q15554 542 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 CYP1B1Q16678 543 aa7.33□□□□□ -1.24
LYSMD3-201ENST00000315948 CCDC38Q502W7 563 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms