RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GJA9P57773 515 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ACTR2P61160 394 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SURF1Q15526 300 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 PTPROQ16827 1216 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 RBM26Q5T8P6 1007 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SH3PXD2AQ5TCZ1 1133 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 C1orf127Q8N9H9 656 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 MAML3Q96JK9 1138 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 FAM81BQ96LP2 452 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TRERF1Q96PN7 1200 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 FRMD8P1Q9BZ68 369 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ADAMTS10Q9H324 1103 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 MRM3Q9HC36 420 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 FGFR1OP2Q9NVK5 253 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SARDHQ9UL12 918 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 LRRK1Q38SD2 2015 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 A0A088AWK7 358 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 HLA-DRAP01903 254 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TFE3P19532 575 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 UBA1P22314 1058 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 NFX1Q12986 1120 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 TRIM71Q2Q1W2 868 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 LEKR1Q6ZMV7 388 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 C4orf50Q6ZRC1 276 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 UNC45BQ8IWX7 931 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SAAL1Q96ER3 474 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 SPATC1LQ9H0A9 340 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 MMADHCQ9H3L0 296 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 ATP13A1Q9HD20 1204 aa8.23□□□□□ -1.09
CNOT4-201ENST00000315544 UTP11Q9Y3A2 253 aaKnown RBP8.23□□□□□ -1.09
CNOT4-201ENST00000315544 E7EVH7 732 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 GAS7O60861 476 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 DGAT1O75907 488 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 RPL22P35268 128 aaKnown RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SCNN1AP37088 669 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 MXI1P50539 228 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 RNASE9P60153 205 aaKnown RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CCDC26Q8TAB7 109 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 WDR60Q8WVS4 1066 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 C1orf54Q8WWF1 131 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 MAELQ96JY0 434 aaKnown RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 HAPLN3Q96S86 360 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 C16orf70Q9BSU1 422 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CXorf56Q9H5V9 222 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 HSFX1Q9UBD0 423 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CAPN7Q9Y6W3 813 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 VCANP13611 3396 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 BCLAF3A2AJT9 711 aaKnown RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SUN1O94901 812 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 UBXN2AP68543 259 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 DNAJC3Q13217 504 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 KYNUQ16719 465 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 DCAF17Q5H9S7 520 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 KIAA0319Q5VV43 1072 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 MBLAC2Q68D91 279 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PLPPR4Q7Z2D5 763 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PASD1Q8IV76 773 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 FEZF2Q8TBJ5 459 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CD99L2Q8TCZ2 262 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CPA5Q8WXQ8 436 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 VPS11Q9H270 941 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PCIF1Q9H4Z3 704 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SLC17A7Q9P2U7 560 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PTCH2Q9Y6C5 1203 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 DMDP11532 3685 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 GPR32O75388 356 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 LINC00271P0C7V0 271 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 FGF3P11487 239 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 KDELR1P24390 212 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 MRPL19P49406 292 aaKnown RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 CYP2J2P51589 502 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 IRAK1BP1Q5VVH5 260 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 MFSD6LQ8IWD5 586 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 C7orf26Q96N11 449 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SH2D3AQ9BRG2 576 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 ACBD3Q9H3P7 528 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 RPAP3Q9H6T3 665 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PPCSQ9HAB8 311 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 SAR1AQ9NR31 198 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 PCDHA10Q9Y5I2 948 aa8.22□□□□□ -1.09
CNOT4-201ENST00000315544 TRUB2O95900 331 aaKnown RBP8.21□□□□□ -1.09
CNOT4-201ENST00000315544 PEX11BO96011 259 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 ALDOAP04075 364 aaKnown RBP8.21□□□□□ -1.09
CNOT4-201ENST00000315544 ADORA2AP29274 412 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 MATR3P43243 847 aaKnown RBP eCLIP8.21□□□□□ -1.091e-6■■■■□ 20.8
CNOT4-201ENST00000315544 PLTPP55058 493 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 TBL3Q12788 808 aaKnown RBP8.21□□□□□ -1.09
CNOT4-201ENST00000315544 SLC14A2Q15849 920 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 CCDC14Q49A88 953 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 RAB41Q5JT25 222 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 FAM26DQ5JW98 314 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 TSTD2Q5T7W7 516 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 DENND1BQ6P3S1 775 aa8.21□□□□□ -1.09
CNOT4-201ENST00000315544 KYAT3Q6YP21 454 aaKnown RBP8.21□□□□□ -1.09
CNOT4-201ENST00000315544 TRIM72Q6ZMU5 477 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms