RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 FAM186BQ8IYM0 893 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 DCLK2Q8N568 766 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 TTC39CQ8N584 583 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 ACDQ96AP0 544 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 B3GNT5Q9BYG0 378 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 ZNF518BQ9C0D4 1074 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 DPEP3Q9H4B8 488 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 SMYD3Q9H7B4 428 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 MMRN2Q9H8L6 949 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 ZDHHC9Q9Y397 364 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 WNT6Q9Y6F9 365 aa13.47□□□□□ -0.25
CKS2-201ENST00000314355 ZNF638Q14966 1978 aaKnown RBP13.47□□□□□ -0.25
CKS2-201ENST00000314355 NUP210Q8TEM1 1887 aaPredicted RBP13.46□□□□□ -0.25
CKS2-201ENST00000314355 LEFTY2O00292 366 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CLDN5O00501 218 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 FOXD2O60548 495 aaPredicted RBP13.46□□□□□ -0.25
CKS2-201ENST00000314355 TADA3O75528 432 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 RETP07949 1114 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 EPB41P11171 864 aaKnown RBP13.46□□□□□ -0.25
CKS2-201ENST00000314355 NDST1P52848 882 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 USP46P62068 366 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 DLG4P78352 724 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 SLC7A9P82251 487 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 ENPEPQ07075 957 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 GOLGA8FQ08AF8 430 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 GOLGA8DPQ0D2H9 430 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 STIM1Q13586 685 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 PUM1Q14671 1186 aaKnown RBP eCLIP13.46□□□□□ -0.253e-7■■□□□ 11.6
CKS2-201ENST00000314355 EML3Q32P44 896 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 WDR44Q5JSH3 913 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 Q6ZS52 159 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CAMKK1Q8N5S9 505 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 SLC22A12Q96S37 553 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
CKS2-201ENST00000314355 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CPQQ9Y646 472 aa13.46□□□□□ -0.25
CKS2-201ENST00000314355 CCDC163A0A0D9SF12 145 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 RNF40O75150 1001 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 ASS1P00966 412 aaKnown RBP13.45□□□□□ -0.26
CKS2-201ENST00000314355 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 FAM200BP0CF97 657 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 HOXA6P31267 233 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 GTF2H1P32780 548 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 RAP1GAPP47736 663 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 GCLMP48507 274 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 SLC8A3P57103 927 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 LMNB2Q03252 620 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 USP4Q13107 963 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 GAS6Q14393 721 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 EDRF1Q3B7T1 1238 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 KRT39Q6A163 491 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 FSTL4Q6MZW2 842 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 DGLUCYQ7Z3D6 616 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 FAM35AQ86V20 835 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 CRYBG2Q8N1P7 616 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 KCNK16Q96T55 309 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 GDPD2Q9HCC8 539 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
CKS2-201ENST00000314355 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
CKS2-201ENST00000314355 COL4A3Q01955 1670 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 LRP3O75074 770 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 AKAP3O75969 853 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 VNN1O95497 513 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 ADH1CP00326 375 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 EGFP01133 1207 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 SLC5A3P53794 718 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 MAP3K7CLP57077 242 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 LPAL2Q16609 132 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 TCERG1LQ5VWI1 586 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 WDR5BQ86VZ2 330 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 ADGRG2Q8IZP9 1017 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 OTUB2Q96DC9 234 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 CYFIP2Q96F07 1278 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 FAXDC2Q96IV6 333 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 GSDMAQ96QA5 445 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 GZF1Q9H116 711 aaPredicted RBP13.44□□□□□ -0.26
CKS2-201ENST00000314355 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 KRT82Q9NSB4 513 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
CKS2-201ENST00000314355 E2F8A0AVK6 867 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 OTOL1A6NHN0 477 aaPredicted RBP13.43□□□□□ -0.26
CKS2-201ENST00000314355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.43□□□□□ -0.26
CKS2-201ENST00000314355 K7ESF4 209 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 APODP05090 189 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 TDGF1P13385 188 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 ADORA2BP29275 332 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 PPP1R2P41236 205 aa13.43□□□□□ -0.26
CKS2-201ENST00000314355 TUBP50607 506 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms