RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 USP27XA6NNY8 438 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BBIP1A8MTZ0 92 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 VCLP18206 1134 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 NNMTP40261 264 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 GNA13Q14344 377 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ANGPT1Q15389 498 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PDK4Q16654 411 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 NOTUMQ6P988 496 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BNC2Q6ZN30 1099 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 LONP2Q86WA8 852 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PLD3Q8IV08 490 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 TTLL6Q8N841 843 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BTBD9Q96Q07 612 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 MXRA8Q9BRK3 442 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 UGT2B28Q9BY64 529 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 DCLK3Q9C098 648 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 OLA1Q9NTK5 396 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 SCN8AQ9UQD0 1980 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 C2CD2LO14523 706 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 STX7O15400 261 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 AP1G2O75843 785 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PDE9AO76083 593 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 SRP72O76094 671 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 KRT75O95678 551 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 SYF2O95926 243 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BAG6P46379 1132 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 NR1H2P55055 460 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 LACTB2Q53H82 288 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PRPF39Q86UA1 669 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF280CQ8ND82 737 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ACSBG1Q96GR2 724 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 SUGCTQ9HAC7 445 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 RAD18Q9NS91 495 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BTBD7Q9P203 1132 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PHF11Q9UIL8 331 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 DDX39AO00148 427 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 MTA2O94776 668 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PDGFRBP09619 1106 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 MLNP12872 115 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 FDPSP14324 419 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 RGS9BPQ6ZS82 235 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 DNAJB8Q8NHS0 232 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PTPRN2Q92932 1015 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 BEGAINQ9BUH8 593 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 APOC4-APOC2K7ER74 178 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 APOC2P02655 101 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 MYCNP04198 464 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ATP6V1C1P21283 382 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 ATP6V1E1P36543 226 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 MAPK8P45983 427 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 GPSM2P81274 684 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 YWHAHQ04917 246 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 COG2Q14746 738 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PRR23BQ6ZRT6 265 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 TATDN2Q93075 761 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 TNPO3Q9Y5L0 923 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L15C9J2P7 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L13C9JLJ4 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L11C9JVI0 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L18D6R9N7 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L22D6RA61 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L17D6RBQ6 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L19D6RCP7 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L20D6RJB6 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PRPF4O43172 522 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 VIL1P09327 827 aaKnown RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 FAM58BPP0C7Q3 252 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 PTX3P26022 381 aaPredicted RBP9.13□□□□□ -0.95
COL6A5-202ENST00000312481 USP17L24Q0WX57 530 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 STK4Q13043 487 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 CAMK1DQ8IU85 385 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 OSBPL11Q9BXB4 747 aa9.13□□□□□ -0.95
COL6A5-202ENST00000312481 GPD1P21695 349 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 OR6B2Q6IFH4 312 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 SLC25A23Q9BV35 468 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 IL22Q9GZX6 179 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 LRMDAQ9H2I8 198 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ANKHQ9HCJ1 492 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 CLIC2O15247 247 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 SERPINI2O75830 405 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 FRG1Q14331 258 aaKnown RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RCN1Q15293 331 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 ERFEQ4G0M1 354 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 OXCT2Q9BYC2 517 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 TRIM49BA6NDI0 452 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 CYP11B1P15538 503 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RENBPP51606 427 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 KCNK10P57789 538 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 RRP1BQ14684 758 aaKnown RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 PPP6R3Q5H9R7 873 aaPredicted RBP9.12□□□□□ -0.95
COL6A5-202ENST00000312481 FUKQ8N0W3 1084 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 AGR3Q8TD06 166 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 SH3GL2Q99962 352 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 hCG_1642624A0A1W2PR95 340 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 DCAF6Q58WW2 860 aa9.12□□□□□ -0.95
COL6A5-202ENST00000312481 LRRC74BQ6ZQY2 392 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms